Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq908 311 2e-79 seq214 176 8e-39 >seq908 Length=183814 Score = 311 bits (344), Expect = 2e-79 Identities = 753/1121 (67%), Gaps = 27/1121 (2%) Strand=Plus/Minus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 || || || ||||| | |||||||| ||| | | ||| | |||| || || Sbjct 171066 GGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGATCGCTCG 171007 Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||| ||||| |||||| ||||||| ||||||||||||| | Sbjct 171006 AGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGG-GCT 170948 Query 221480 GTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 || | ||| || | || ||| |||||| ||||||| || || | ||||||||||||| Sbjct 170947 GTCGAAGGCGTAACCCATGATCATGAAAG-CGTCGGCGAGACCGTTGACTCCGATACCGA 170889 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||| | ||| | | ||||||| ||| || || || || || ||||||| |||| Sbjct 170888 TGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGACATCGA 170829 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||||||||||| | | ||| || |||||| ||||||| | | | Sbjct 170828 TGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGTCGT 170769 Query 221658 ACACCAACTCGCCGCCGTCGTG-GAGGGGTTCC--ACAAAAGCGTTTAGGGCAACGCTGG 221714 | | || | ||| ||| ||| | | || ||| || || | |||| Sbjct 170768 ATGTC--CTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATACTGG 170712 Query 221715 CCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGT 221774 | ||||| || || || ||||| ||| | | |||| |||||||| || || |||| Sbjct 170711 CAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGT 170652 Query 221775 TGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGT 221834 | |||||||||||| || |||| || || || |||||||| || ||||||||||||| Sbjct 170651 TAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTGT 170592 Query 221835 AGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTC 221894 | ||||| || || |||||||||| ||||||| | |||| || ||| || | | Sbjct 170591 AAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTT 170532 Query 221895 TGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGT 221954 || | || || | | |||||| || | | | || || ||||| | Sbjct 170531 GAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCG-TAGAGAGCCT-- 170475 Query 221955 CAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCC 222014 | |||| || ||||| | || | || || || ||| |||||| |||||||| || Sbjct 170474 CGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACC 170415 Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074 | | ||| | || ||| | || |||||| | ||| |||||||| || || | |||| Sbjct 170414 ACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAGA 170355 Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134 | || | || || ||||||| ||||| ||| ||||| || || | ||||| || | Sbjct 170354 GCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGA 170295 Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194 ||||| |||||| ||||| | |||| ||| | || || || |||||||||||||||| Sbjct 170294 CGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCCT 170235 Query 222195 GATCCACCATCCTCTCCAGAG----CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 | || | | | | || | |||||||| |||||| | || || | ||||| Sbjct 170234 GGTCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 170179 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT-TACTGGCAG-ACA 222308 || |||||| || || |||||||| ||| | || | | | | ||| | | Sbjct 170178 GAGACACCGTTAGTTCCGGCAATGTACGAGCCG--GTACCACGGATGCAGTGGATGTTGA 170121 Query 222309 TGCCGATACCACC-GGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATG 222367 |||||| ||||| | ||| || | ||||||||||||| ||||||| ||||| ||| Sbjct 170120 GGCCGATGCCACCAGCCGTCTTGC-TGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATA 170062 Query 222368 CCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTG 222427 || || || ||||| ||||| | | | | ||| || || || ||||| |||| |||| Sbjct 170061 CCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGT 170002 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468 | | ||||| || || ||||| ||| || || ||||| Sbjct 170001 GTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 169961 >seq214 Length=80960 Score = 176 bits (194), Expect = 8e-39 Identities = 187/247 (76%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 25795 GCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAAC 25854 ||||| ||| ||| ||| | ||||| ||||| ||||||| || ||||||||| Sbjct 11750 GCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCAAC 11691 Query 25855 AGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTT 25914 | || | | || |||| |||||| ||||| ||||||||||| || ||||| ||||| Sbjct 11690 GACGAGGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTC 11631 Query 25915 TTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTG 25974 ||| ||| || || || ||||||||||||||||| || || ||||||||| || Sbjct 11630 TTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTC 11571 Query 25975 TACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTG 26034 ||| |||||||||||||||||| | ||||||||||| |||| || ||||| ||| || Sbjct 11570 ACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTG 11511 Query 26035 CTCTACA 26041 |||| || Sbjct 11510 CTCTTCA 11504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928824644067840