Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq1297 96.9 1e-15 >seq1297 Length=17568 Score = 96.9 bits (106), Expect = 1e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3778 CTCCATCCGCACGATCGGCAAGGTGATGTCGCCGTCGAGTACCTTCCGCTGGAGCTTTTC 3837 ||| || || |||| |||| || ||| |||||| | ||||| || ||| | || Sbjct 16901 CTCGATGCGGACGAGGGGCAGGGCGATCTCGCCGGCCGACACCTTGCGGATCAGCATCTC 16960 Query 3838 GGGAGACAGGTGCGCGAAGTAGTCGCGGCACACCAGATCGAGGGGGATGACGGCACGGCC 3897 ||| | |||||| ||| ||||| ||||| |||||||| | ||||| ||||| || Sbjct 16961 GGGCGTCAGGTGGCTGAAATAGTCCCGGCAGACCAGATCCACCGGGATCACGGCGCGCGG 17020 Query 3898 GTCGTATTGGGCCATCAGGAGGAAAGCGGTGTTCATGG 3935 | |||| || ||||| |||| ||| ||||||||||||| Sbjct 17021 GCCGTACTGCGCCATGAGGATGAAGGCGGTGTTCATGG 17058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201317340538248