Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18]
1,736 sequences; 33,771,691 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq725 95.1 8e-14
>seq725
Length=189678
Score = 95.1 bits (104), Expect = 8e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611
||||||||||| || | ||||| || ||||| | || ||||||| || ||
Sbjct 146106 CGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTG 146165
Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671
| | ||| || | ||||| || || || || ||||| ||||| || |||||||| ||
Sbjct 146166 CGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCC 146225
Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAG 480730
||||||||||| |||||| || || ||||| || || | | | | | ||| ||
Sbjct 146226 TCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGA-CTTCGAG 146284
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| ||||| || |||||||| ||||| ||||| || ||
Sbjct 146285 AGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 146323
Score = 93.3 bits (102), Expect = 3e-13
Identities = 156/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 480552 CGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609
||||||||||| ||||| ||||| || ||| ||| || || ||||||| || |
Sbjct 150885 CGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTTTGGATG--TTGTAATCAGAAAGGG 150828
Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669
| | || || || ||||| || || || || || || || || || |||||||| |
Sbjct 150827 TGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGC 150768
Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCA 480728
| ||||||||||| ||||| |||||| ||||| || || | | | | | |||
Sbjct 150767 CCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAGCTCTCGA-CTTCG 150709
Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || ||||| || |||||||| ||||| ||||| || ||
Sbjct 150708 AGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 150668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268104734536928
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |