Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq908 178 2e-39 seq214 113 5e-20 >seq908 Length=183814 Score = 178 bits (196), Expect = 2e-39 Identities = 555/848 (65%), Gaps = 25/848 (3%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||||||||||||| ||| || | Sbjct 169870 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 169929 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 169930 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 169988 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| ||||| ||||| | || || ||||| |||||||| || ||| ||||| | Sbjct 169989 TCAACGCTGGCACACCCAACCCTCAAATGTCATCATGCTTCCTGGTCACCATGAAGGACG 170048 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||||||| | |||||||| | || || | | || || ||| ||| ||||| Sbjct 170049 ACTCAATCGATGGTATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 170108 Query 75450 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTA--TTCGGG 75503 | || || || | ||||||| || || ||| | | |||||| || | Sbjct 170109 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGG------CTCGTACATTGCCG 170162 Query 75504 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 75563 | || || ||| || | ||||| | || ||||||||||| || ||| ||| || | Sbjct 170163 GAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTC 170222 Query 75564 GCTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAAC 75617 |||| || | || | || ||||| ||| | || |||| ||||| | || | Sbjct 170223 GCTACGTCGACCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACATTGAGC 170279 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 | ||||| | || || | |||||||| || | | ||||| || | || |||| Sbjct 170280 CCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGG 170339 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || | || ||||| | |||| ||||| |||||| | ||||||||||| || | Sbjct 170340 TCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCAGACTTGTTCATGAAGCGAGTCG 170399 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 | || || | ||||| || | || || | | || || |||||| | || | Sbjct 170400 AACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCT 170459 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 || || ||||| || || |||||| ||||| || |||||| | || | Sbjct 170460 ACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGCTCGCCGAA 170519 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | || | || | | | | ||||| | || ||||| | | |||||||||||||| | Sbjct 170520 CCGT-CAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAAC 170578 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | |||||||||||||| ||| |||| ||| ||||||||||| | || || Sbjct 170579 CCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACCAAAAGAACCTCGGCACC 170638 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 |||||| |||| || || |||||||| || | ||||||| | | ||||||| ||| Sbjct 170639 ATCAAGTGCTCTAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAGGTCGCT 170698 Query 76037 GTTTGCAA 76044 || ||||| Sbjct 170699 GTCTGCAA 170706 >seq214 Length=80960 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||||||||||| |||| ||||| || |||||||||||||||||||| || | Sbjct 11677 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 11618 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| | |||||||| ||||||||||| || || |||||| || | Sbjct 11617 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 11558 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | || || |||||| |||||||| ||| || ||||| Sbjct 11557 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 11518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556654439680