Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq84 131 6e-26 >seq84 Length=24232 Score = 131 bits (144), Expect = 6e-26 Identities = 188/265 (71%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 44744 ATCGAATAGCGGGCTGAGTATTCATTCACGTTGGCCGTCCGGTGACGGATCCATTGGCGG 44803 || ||||| |||||||| || || || || ||| | ||||| | ||||||||||||| Sbjct 23233 ATGGAATATCGGGCTGAATACTCGTTGACCGACGCCATTCGGTGCCTGATCCATTGGCGG 23174 Query 44804 GCCACAAACACGGGCAGTTTGACATGAAGTTTGATCTCACAACCCTCAAACGGGCTGGTG 44863 |||||||| | ||| || ||||| ||||| || | ||| || ||||| |||| Sbjct 23173 GCCACAAAAATGGGAAGCTTGACGTGAAGCTTCAGCTCTGCCATTTCGAACGGAGTGGTA 23114 Query 44864 TGCCAATGGCGCATAAGGTAGCGGATTAGGTCGCGGTCCTTGCTGACACCCTTGGTGCCC 44923 || ||| |||| ||| || |||||||| | || || | | |||||||| || || Sbjct 23113 TGATAATTCCGCAGAAGATACCGGATTAGCGCTCGATCATCACGAACACCCTTAGTTCCG 23054 Query 44924 TGACCGTAGGATACGCGGGCCATCTGGACGATAGCGCCGTCCGTGCCCATGTAGTCGATT 44983 || |||||||| | ||| |||||||| || | ||| ||||||||| || | Sbjct 23053 ATTCCATAGGATACTCTGGCAGCCTGGACGACGGCATCATCCCCGCCCATGTAATCAACG 22994 Query 44984 GGTCGGACAAAGCCATGATCTAGGA 45008 ||| ||||| |||||||||| || Sbjct 22993 ACTCGTACAAATCCATGATCTAAGA 22969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182140245101440