Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq908 178 2e-38 seq214 168 8e-36 seq107 134 2e-25 seq942 109 7e-18 seq920 102 1e-15 seq931 93.3 5e-13 >seq908 Length=183814 Score = 178 bits (196), Expect = 2e-38 Identities = 274/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 170236 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 170177 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 170176 GACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 170117 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| ||||||||||| || || Sbjct 170116 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCATC 170057 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 ||| |||||| |||||||| || || ||||| || || |||| |||| | ||||| Sbjct 170056 GATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTGTGCC 169997 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 169996 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 169937 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 169936 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 169892 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 169891 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 169859 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 170372 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 170313 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 170312 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 170253 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 170252 GACGCTTGTTGCCACC 170237 >seq214 Length=80960 Score = 168 bits (186), Expect = 8e-36 Identities = 212/286 (74%), Gaps = 5/286 (2%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 11535 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 11594 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 11595 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 11654 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||||||| || | |||| | ||||||||| || ||||| Sbjct 11655 GGCAACCAGGCGCTCGGCAAAGGTG--GA-GTCCTCGTCGTTGATCCAGCGCAGGGCCCA 11711 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || |||||| ||||||| || | Sbjct 11712 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCT 11770 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 11771 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 11816 Score = 118 bits (130), Expect = 1e-20 Identities = 165/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 11914 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 11973 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || |||||||| || || |||||||| |||| Sbjct 11974 GACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGAT 12033 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | ||||| Sbjct 12034 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 12093 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 12094 GATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 12144 Score = 102 bits (112), Expect = 1e-15 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 11251 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 11310 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||| |||||||| ||||||||| Sbjct 11311 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 11370 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 11371 TGGCTCATAAGTCGTGCGTTCATGCCGAT 11399 >seq107 Length=200963 Score = 134 bits (148), Expect = 2e-25 Identities = 271/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| ||| | || |||||||||||| |||| || || || Sbjct 112537 GTCACAACCTACGGCGAGTCTCACTGCGCCTCTGTCGGCTGCATCGTCGATGGTGTTCCC 112478 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||| ||| Sbjct 112477 CCGGGTATGGCCCTCTCTGATGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCCGGC 112418 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || || |||||||| || Sbjct 112417 CAGTCCAACCTGACCACCCCGCGCGACGAGAAGGACCGAGTTCAGATCCAGTCCGGTGTC 112358 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||||||||| | ||| | | | | || |||| || |||||| Sbjct 112357 GAAAAGGGCATCACGCTCGGTACTCCCATAGCCATGCGCGTCCAGAACCAGGATCAGCGG 112298 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | || || | | | || ||||| ||||| ||||| |||||| Sbjct 112297 CCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGACTAC 112238 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| ||||| ||||| ||| || || || Sbjct 112237 ACCTACCTCGAGAAGTACGGTGTCAAGGCTAGCTCGGGTGGAGGACGGAGCTCGGCTCGG 112178 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| | ||| || || || ||||| || || ||||| Sbjct 112177 GAGACGATTGGGCGTGTGGCTGCAGGCGCCGTGGCGGAGAA 112137 Score = 87.8 bits (96), Expect = 2e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||| || || ||||| || ||| |||||||| |||||| ||||||||||| || Sbjct 111808 GGTCTCGGTGAACCATGCTTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCC 111749 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| || ||||||| |||||| ||||| ||| || Sbjct 111748 ATCCCCGCTACCAAGGCCTTCGAGGTTGGCTCCGGCTT 111711 >seq942 Length=181280 Score = 109 bits (120), Expect = 7e-18 Identities = 189/267 (71%), Gaps = 16/267 (6%) Strand=Plus/Minus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 137147 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 137088 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 137087 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 137038 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 137037 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAG 136978 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| |||||||| ||| |||||||||| |||||||| Sbjct 136977 GAGTTCTTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGAC 136919 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 136918 GGCCGAGACGGGATACATTCAGCGACG 136892 >seq920 Length=462479 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || || ||||| ||||||||||| | || Sbjct 117624 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGA 117565 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| ||||||| |||| | Sbjct 117564 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGA 117505 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 117504 TGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGT 117445 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 117444 GCACCTGCTTGAGGACACGGTAGATG 117419 >seq931 Length=181658 Score = 93.3 bits (102), Expect = 5e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || ||||| || ||||||||||| | | || Sbjct 90736 GCTTGGAGAGTTCACCGGGGAGGATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGA 90795 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | || || | || |||| ||||||| |||| | Sbjct 90796 TGGTGCTCTTCTTGTTGTATGATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGA 90855 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || || ||||||| || | ||| | |||||||||||| || |||||||| Sbjct 90856 TGTCTTGTACGAAGGAGTTCAGGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 90915 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || |||||||| || ||||||| Sbjct 90916 GGACTTGCTTGAGGACACGGTAGATG 90941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106996735710312