Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq214 183 5e-40 seq920 147 3e-29 seq931 132 8e-25 seq942 107 3e-17 seq908 102 1e-15 seq416 100 5e-15 >seq214 Length=80960 Score = 183 bits (202), Expect = 5e-40 Identities = 221/300 (74%), Gaps = 3/300 (1%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 11535 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 11594 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||| ||||| ||||| ||||| Sbjct 11595 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 11654 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||| ||| | |||| | ||||||||| || ||||| Sbjct 11655 GGCAACCAGGCGCTCGGCAAAGGTG---GAGTCCTCGTCGTTGATCCAGCGCAGGGCCCA 11711 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || |||||| ||||||| || || Sbjct 11712 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCTG 11771 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 11772 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 11831 Score = 111 bits (122), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 11939 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 11998 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||||| || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 11999 TCTGACGCGGCGAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 12058 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| ||||||||| ||||| || || Sbjct 12059 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCGGCCGTCCAGAACGAT 12118 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 12119 GCCTCTGCCTTCTTGTACATTTGCCAGATC 12148 Score = 93.3 bits (102), Expect = 7e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||| | |||||||| |||||| | ||| || || | | Sbjct 11251 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 11310 Query 793989 AGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTAC 794048 ||||||||||||| |||||| | | ||||| ||||| ||||| ||||| |||||| Sbjct 11311 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 11370 Query 794049 TGGCACATGAGGGCGGCGTTCATGCCGAT 794077 |||| ||| || |||||||||||||| Sbjct 11371 TGGCTCATAAGTCGTGCGTTCATGCCGAT 11399 >seq920 Length=462479 Score = 147 bits (162), Expect = 3e-29 Identities = 173/234 (74%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 117662 GTACTTGGTGACGGACTTGGTTCCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 117603 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || || ||||| ||||||||||||| ||| || |||||| | Sbjct 117602 GATAAGTCGGACAGCGGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 117543 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| ||||||| |||| ||||| | ||| || ||||||| Sbjct 117542 TGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTCAG 117483 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 117482 GATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 117429 >seq931 Length=181658 Score = 132 bits (146), Expect = 8e-25 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 90698 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 90757 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 90758 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 90816 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||||| Sbjct 90817 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTCA 90876 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||||||||| || ||||||||| || |||||||| || Sbjct 90877 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACTTGCTTGAGGAC 90931 >seq942 Length=181280 Score = 107 bits (118), Expect = 3e-17 Identities = 110/141 (78%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 137031 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAGGAGTTC 136972 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| |||||||||||| |||||||||| |||||||||||||| Sbjct 136971 TTCTTCCACGCCAT-GGCGGGTCGCGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 136913 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 136912 GACGGGATACATTCAGCGACG 136892 >seq908 Length=183814 Score = 102 bits (112), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCG 2071859 || ||||| ||||| ||||| | |||||||| || ||| | || | || || Sbjct 170448 AGACCGGGGCACTCGGCGGGGCACATCAGCGACCACTCTCCGTTCTGTT-CGACTCGCTT 170390 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| ||| |||| ||| |||| ||||| || || || ||| ||||||||| Sbjct 170389 CATGAACAAGTCTGGGATCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTT 170330 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | |||| || ||| | |||||| ||||| | ||| Sbjct 170329 GCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTA 170270 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||| ||||| || |||||| ||| || Sbjct 170269 GATGGCGAAGGCACCTGGACGCTTGTTGCCACC 170237 >seq416 Length=195443 Score = 100 bits (110), Expect = 5e-15 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | |||| || || || ||| Sbjct 117299 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCTTA---AGACCGGGTACC 117243 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 117242 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTAGGCAGGACCTCCTCGGCA 117183 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 117182 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 117123 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 |||||||| || || | || | ||||||| ||| Sbjct 117122 TCGTCGAGCGCTTGGA-GACCGGGGTAGATGAG 117091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916061733762104