Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq725 131 1e-25 seq1576 82.4 6e-11 >seq725 Length=189678 Score = 131 bits (144), Expect = 1e-25 Identities = 172/236 (73%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 29552 ATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTAT 29611 ||| ||| || || | | ||| || ||||||||||| ||||| || ||||||||||| | Sbjct 145636 ATCATTGGCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGT 145695 Query 29612 AATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT 29671 | || | | ||||| ||| ||||| || ||||| || | ||||||| ||||| | Sbjct 145696 AGTCAGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGT 145755 Query 29672 CCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAA 29730 |||| || || ||||| ||||| || ||| || || |||||| | || | ||||| || Sbjct 145756 CCGGGGGGATGCCCTCCTTGTCCTG-AATCTTCGTCTTGACATTGTCAATGGTGTCTGAT 145814 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || || ||||| || | ||| || || || |||||||| Sbjct 145815 GATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||||||||| ||||| || ||||||||||| || |||| || |||||| Sbjct 151108 ACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCC 151049 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || ||||| || | ||||||| || || ||||| ||||| ||||| || Sbjct 151048 GTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTT 150989 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || || || || | || | ||||| || ||| || || || || | Sbjct 150988 GTCCTG-AATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGA 150930 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | ||| || || || |||||||| Sbjct 150929 TGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 >seq1576 Length=101731 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | || || |||||||||||||| ||||| || || | | || || Sbjct 30294 ACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCC 30235 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || ||||| || ||||| || | || | | ||| || || || || || ||||| || Sbjct 30234 GTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTT 30175 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| || || || ||||| | || | ||||| || ||||| || || || | Sbjct 30174 GTCTTG-GATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGA 30116 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | || || ||||| |||||||| Sbjct 30115 TGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 30079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211049724776