Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq214 172 8e-37 seq920 104 3e-16 seq931 100 4e-15 >seq214 Length=80960 Score = 172 bits (190), Expect = 8e-37 Identities = 221/297 (74%), Gaps = 6/297 (2%) Strand=Plus/Minus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||| ||||| || || ||||| ||||| |||||||| ||| | ||||| | Sbjct 11831 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 11772 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC-GTCGGTGAGGAAAAAGGCCGA 1456133 || || ||||||| |||||| || || | || |||| | | | |||||||||| Sbjct 11771 CAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCG-TCAAGCAAAAGGCCGA 11713 Query 1456134 CTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGC 1456193 ||||| || ||||||||| | |||| | || || |||||||||||| || || | | Sbjct 11712 GTGGGCCCTGCGCTGGATCAACGACGAGGAC-TCCAC-CTTTGCCGAGCGCCTGGTTGCC 11655 Query 1456194 TTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAG 1456252 ||||| || || ||||| ||||| ||||| ||| |||| | ||||||| ||||||||| Sbjct 11654 TTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAG 11595 Query 1456253 AAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||| || ||||||||||||| || ||| |||||| | ||||| || ||||| Sbjct 11594 AAGCGTGGTCTCATGCCCGGTC-TCACCTTCTCCAACGAGCTCATCAGCCGAGACGA 11539 Score = 122 bits (134), Expect = 1e-21 Identities = 171/237 (72%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| || || ||||| ||||||||| |||||| Sbjct 12148 GATCTGGCAAATGTAC-AAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACC 12090 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTC---GCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | | |||| | | |||||| | ||| |||| ||||||| || ||||||| Sbjct 12089 TTTCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCA 12030 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||||||||| || || |||||| ||||||||||| ||||||||| | || Sbjct 12029 GCCACGTCCTCGCATTCTT-CGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAG 11971 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 || || | ||||||||| ||||||| || | || ||||| ||||| ||| Sbjct 11970 CGGTTCAGCTCAGAGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 11914 Score = 87.8 bits (96), Expect = 3e-11 Identities = 113/152 (74%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 1456586 ATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCCTGC 1456645 |||||||||||||| || || ||| |||||||||| |||||| ||||| ||||| |||| Sbjct 11399 ATCGGCATGAACGC-ACGACTTATGAGCCAGTACATCGAATTT-GTCGCTGACCGACTGC 11342 Query 1456646 TCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATGGAG 1456705 | | || ||||| || ||||||||||| | | || || ||| | |||||| Sbjct 11341 TGGTAGCCCTCGGGAACG-AGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAG 11283 Query 1456706 TTGATCTCGCTCGAGGGCAAGACCAACTTTTT 1456737 |||||||| | |||||||| ||||| || Sbjct 11282 AACATCTCGCTGCAAGGCAAGACAAACTTCTT 11251 >seq920 Length=462479 Score = 104 bits (114), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || |||||||||||||||||| || | | ||| || |||||| | Sbjct 117420 ATCTACCGTGTCCTCAAGCAGGTGCACCCCGACACTGGT-----ATC-TCAAACAAGGCT 117473 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| ||||||| || ||| | ||||| |||| ||||||| |||||||| Sbjct 117474 ATGGCCATCCTGAACTCCTTCGTCCAAGACATCTTCGAGCGCATCGCATCCGAGGCCTCC 117533 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || || ||||||| || ||| | ||||||||||| ||||| || Sbjct 117534 AAGCTTGCATCCTACAACAAGAAGTCGACCATCTCTGCCCGCGAGATCCAAACCGCTGTC 117593 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| ||||| ||| ||||||| |||| ||||| |||| Sbjct 117594 CGACTTATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCTGAGGGAACCA 117645 >seq931 Length=181658 Score = 100 bits (110), Expect = 4e-15 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||| || |||||||| || |||||| || | | ||| ||||||||| || Sbjct 90940 ATCTACCGTGTCCTCAAGCAAGTCCACCCCGACACTGGT-----ATC-TCCAACAAGGCC 90887 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| | ||| ||||||| || || | ||||| |||| ||||||| |||| || Sbjct 90886 ATGGCCATCCTGAACTCCTTCGTACAAGACATCTTCGAGCGCATCGCATCCGAAGCTTCC 90827 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || || | ||||||| | ||| ||| | | ||||||||||| || ||||| Sbjct 90826 AAACTCGCATCATACAACAAGAAGAGCACCATCTCCGCACGCGAGATCCAAACAGCCGTC 90767 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || ||| | | ||| ||||| ||| ||||||| |||| ||||| |||| Sbjct 90766 CGACTCATCCTCCCCGGTGAACTCTCCAAGCACGCCATCTCGGAGGGGACCA 90715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177643759609232