Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq725 105 6e-18 seq1576 104 2e-17 seq1017 86.0 5e-12 >seq725 Length=189678 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | ||||| || | || || ||||| || || ||||| || Sbjct 146100 CCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 146159 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| | || || | ||| || |||||| | |||||||||||||| ||||| || Sbjct 146160 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGA 146219 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| | |||| | | || | ||||||| | || ||| Sbjct 146220 ATGCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACT 146279 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || ||||| |||| ||||| || || || || || ||||| |||||| Sbjct 146280 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 146327 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || |||||||| |||||||| | | |||| |||||||| Sbjct 151101 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 151042 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | || | |||||||| ||||| || | ||||| || || Sbjct 151041 AGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 150982 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | |||| | | || | ||||||| | ||| || || || || || | ||| Sbjct 150981 ATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTTG 150922 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || || || ||||| |||||| Sbjct 150921 CCGGTGAGGGTCTTGACGAAGATCTGCATA 150892 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | || || || ||||| || ||||| ||| Sbjct 146556 CCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAA 146615 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| ||||| || || |||||| | |||||||||||||| ||||| || Sbjct 146616 AGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 146675 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || ||||||| | || | | || | ||||| | || ||||| Sbjct 146676 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACC 146735 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCAC 27235 || || || || | ||||| |||||||| || || Sbjct 146736 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 146770 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||| | || | |||||||| | || || || |||||||| |||||||| Sbjct 145643 GCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 145702 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | |||| | ||||||||||| || |||||| | || | ||||| || ||||| || Sbjct 145703 GAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGG 145762 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || ||||| | || | | || | ||||||| | ||| || Sbjct 145763 GATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCAC 145822 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || || ||||| |||||| Sbjct 145823 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATA 145871 >seq1576 Length=101731 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || |||||||| || ||||||||| | | || ||||||||||||| || ||| Sbjct 30275 GTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCG 30216 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | |||||||| ||||| || || || | ||||| || || ||||||| | || Sbjct 30215 GCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 30156 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | || || || || || || || | ||||| || || || Sbjct 30155 ACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGTGTC 30096 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||| ||||| Sbjct 30095 TTGACAAAGATCTGCAT 30079 >seq1017 Length=42706 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 27031 ACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCT 27090 |||| | ||||| || | || || || || || || ||||||||| | | |||| Sbjct 11191 ACCGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGAC 11250 Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||| |||||||| || |||||| | |||||||||||||| ||||| || | ||| || | Sbjct 11251 CGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCT 11310 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || ||||||| | || | || || | | ||| | | || || || || || | Sbjct 11311 TGTCCTGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGA 11370 Query 27211 TAGATTTGCCCGTCAGAGTTTTCAC 27235 | | ||||| || || || || || Sbjct 11371 TCGTCTTGCCGGTGAGGGTCTTGAC 11395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424925409450432