Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq214 109 2e-18 >seq214 Length=80960 Score = 109 bits (120), Expect = 2e-18 Identities = 131/177 (74%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755 || ||| | |||||| || || || ||||||| || || || | || || |||| Sbjct 11679 CACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCT- 11621 Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815 |||| ||||||||||||||| | || |||||||| || |||| |||||| ||||| | Sbjct 11620 CTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCA 11561 Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872 |||| || ||||| || ||||||||| |||| |||||| || || | |||| || Sbjct 11560 ACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTTCA 11504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588300671436520