Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq908 165 1e-35 seq214 113 6e-20 >seq908 Length=183814 Score = 165 bits (182), Expect = 1e-35 Identities = 556/851 (65%), Gaps = 31/851 (4%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | ||| || Sbjct 170706 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTAGAG 170647 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT-GCACGCATCCTTGTAGAG 111369 | ||| || || || | ||||||||||| ||| ||| ||| || |||||||| || Sbjct 170646 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTGTAAAG 170588 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||||||||| | | ||||| || | ||||| | | | | Sbjct 170587 CATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGC 170528 Query 111429 CTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 || | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 170527 CTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAA 170471 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 ||| || || | || | |||||| || || | | || || | || ||||| | Sbjct 170470 CTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACCACTC 170411 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || | || || ||||||||||| | |||||| ||||| |||| | ||||| || Sbjct 170410 TCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAGAGCTC 170351 Query 111607 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 170350 ACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTC 170291 Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 111720 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 170290 AGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTG 170234 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 | || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 170233 GTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 170174 Query 111781 ACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCAT 111834 ||| || || || || |||||| | | ||| || || ||||||| | Sbjct 170173 ACCGTTAGTTCCGGCAATGTACGAG------CCGGTACCACGGATGCAGTGGATGTTGAG 170120 Query 111835 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 111894 || || || |||||| ||| ||| || || | | || || | |||||||| Sbjct 170119 GCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACC 170060 Query 111895 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 111954 | ||||||||| ||||| ||| || |||||||| ||||| || || | ||||| Sbjct 170059 ATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTGT 170000 Query 111955 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 112013 ||||| ||||||||||| || | || || |||| ||| | | ||||| || || Sbjct 169999 GCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGT 169941 Query 112014 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | || || | | | || ||| |||||||||||||| || || ||||||| || Sbjct 169940 AAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCA 169881 Query 112074 TGTACTGTGGG 112084 ||| || ||| Sbjct 169880 TGTGTTGGGGG 169870 >seq214 Length=80960 Score = 113 bits (124), Expect = 6e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 11518 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 11577 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||| Sbjct 11578 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 11637 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 ||||| || ||||| |||| ||||| ||||| |||| Sbjct 11638 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGG 11677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628018371705600