Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq908 194 2e-44 seq214 114 2e-20 >seq908 Length=183814 Score = 194 bits (214), Expect = 2e-44 Identities = 558/850 (66%), Gaps = 19/850 (2%) Strand=Plus/Minus Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 || || || || |||| | ||||||| | | ||||||| || || |||||||||| | Sbjct 170712 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 170653 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || || | ||| |||||||| | ||||||||| || ||||| |||| || |||||| Sbjct 170652 TTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTG 170593 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898 ||||||||| | || | || |||||||| || | || ||||| || | ||| | | Sbjct 170592 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 170533 Query 118899 GCAGCTGGCACAGT--GGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956 ||| || || |||| || || ||||| ||||||||| |||||| || | Sbjct 170532 TGAGCCTTGACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCT 170475 Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016 | ||||| || || | | || | ||| || || || | ||||| | || |||| Sbjct 170474 CGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACC 170415 Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076 | | || || || || ||||||||||| | |||||||||||| || || |||||| Sbjct 170414 ACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAGA 170355 Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136 | || || || | || || | || || || | | || | || || | || Sbjct 170354 GCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGA 170295 Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190 || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 170294 CGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCAC 170238 Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250 |||||| || || | || ||| ||| || || |||||||| || | |||||| | | Sbjct 170237 CCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 170178 Query 119251 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308 | || || || || || |||||| | | | | || |||||||| | Sbjct 170177 AGACACCGTTAGTTCCGGCAATGTACGAGCC--GGTACCACGGATGCAGTGGATGTTGAG 170120 Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368 || || || || ||| ||| ||| ||||| | |||| || ||||||| || Sbjct 170119 GCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACC 170060 Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428 |||||| ||||| |||| | | || |||||||| ||||||||||| ||||||| Sbjct 170059 ATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTGT 170000 Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGT 119487 |||||||||||||| || || | || ||| |||| ||| | | ||||| || || Sbjct 169999 GCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGT 169941 Query 119488 AGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547 | || || | | | || ||| |||||| || |||| | || ||||| | || Sbjct 169940 AAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCA 169881 Query 119548 TGTATTGGGG 119557 ||| |||||| Sbjct 169880 TGTGTTGGGG 169871 >seq214 Length=80960 Score = 114 bits (126), Expect = 2e-20 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075 ||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 11518 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 11577 Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 11578 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 11637 Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAA 130194 ||||| || || || |||| || ||||| ||||||| | | | | | || | | Sbjct 11638 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTG-GAGTCCTCGTCGTTGAT 11696 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGG-ACGGTCTGGATCGCTTCAA 130253 ||| || ||||||| ||||||| || || ||||| | ||||| || || || | Sbjct 11697 CCAGCGCAGGGCCCACTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATGGCGTCGA 11755 Query 130254 AGAG 130257 |||| Sbjct 11756 AGAG 11759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618421779956160