Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq908 176 5e-39 seq214 127 2e-24 >seq908 Length=183814 Score = 176 bits (194), Expect = 5e-39 Identities = 534/815 (66%), Gaps = 25/815 (3%) Strand=Plus/Plus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| || ||||| ||||||| || || |||| || || ||| ||| || | Sbjct 169870 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 169929 Query 104281 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 169930 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 169988 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| ||||| ||||| | || |||||||| |||||||| || ||| ||||| | Sbjct 169989 TCAACGCTGGCACACCCAACCCTCAAATGTCATCATGCTTCCTGGTCACCATGAAGGACG 170048 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 |||||||| | |||||||| | || || | | || || ||| ||| ||||| Sbjct 170049 ACTCAATCGATGGTATCTACGACACCCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 170108 Query 104460 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTA--TTCGGG 104513 | || || || | ||||||| || || ||| | | |||||| || | Sbjct 170109 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGG------CTCGTACATTGCCG 170162 Query 104514 GGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGC 104573 | || || ||| || | ||||| | || ||||||||||| || ||| ||| || | Sbjct 170163 GAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTC 170222 Query 104574 GCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGC 104627 |||| || | || | ||| ||||| | || | |||| |||| |||||| Sbjct 170223 GCTACGTCGACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGC 170279 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 | |||||| | || || | |||||||| || | | ||||| || | ||||||| Sbjct 170280 CCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGG 170339 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || ||||||| ||| || ||||| ||||| | ||||||||| |||| | Sbjct 170340 TCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCAGACTTGTTCATGAAGCGAGTCG 170399 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 | ||| || | ||||| || | || || | | || || |||||| | |||| | Sbjct 170400 AACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCT 170459 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG- 104866 || || ||||| || || || ||| ||||||||| || ||||| || | || Sbjct 170460 ACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGC-TCGCCGA 170518 Query 104867 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 104926 || || ||| | | ||| | || ||||| || |||| || |||||||| | Sbjct 170519 ACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAAC 170578 Query 104927 CCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 104986 || | |||||||||||| ||||| ||||| ||| || |||||||| | || Sbjct 170579 CCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACCAAAAGAACCTCGGCACC 170638 Query 104987 ATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGA 105021 |||||| | || || || || || || ||| |||| Sbjct 170639 ATCAAGTGCTCTAACCTGTGCACGGAGATCATGGA 170673 >seq214 Length=80960 Score = 127 bits (140), Expect = 2e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 11677 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 11618 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 11617 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 11558 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||| ||| || |||||||| || ||| || ||||| Sbjct 11557 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 11518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583248143240640