Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1326 145 2e-29 seq725 123 8e-23 >seq1326 Length=227261 Score = 145 bits (160), Expect = 2e-29 Identities = 462/711 (65%), Gaps = 14/711 (2%) Strand=Plus/Minus Query 349226 TATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGT 349285 || || ||||| || || ||||||||||| || || || | || || || ||||| ||| Sbjct 80846 TACTCCTGTGTCGCCGTATGGCAAAATGACCGGGTTGAGGTCATCGCCAACGATCAGGGT 80787 Query 349286 AACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCT 349345 ||| | ||||| || |||||||| || || ||||| | ||||| | || ||||| | Sbjct 80786 AACCGCACAACCCCCTCATACGTCGCCTTCACCGACTCGGAGCGCCTCATCGGTGACGCC 80727 Query 349346 GCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATT 349405 || || || || | || || || | || || || || || || |||||||| || Sbjct 80726 GCCAAGAACCAGACCGCCATGAACCCCCACAACACAGTCTTCGACGCCAAGCGACTCATC 80667 Query 349406 GGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGT- 349464 || | | || ||||| ||| || || | || || | || || | || Sbjct 80666 GGCCGCAAGTTCGCTGACTCCGAGGTACAGTCCGACATGAAGCACTGGCCCTTCAAGGTC 80607 Query 349465 -TGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAA 349522 | |||| ||| || ||||| || |||| || || || || || || || | Sbjct 80606 ATCGACCAA-----GGTACCAAGCCAATAATCCAGGTCGAGTACAAGGGCGAGACCAAGA 80552 Query 349523 CAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTG 349580 || || |||| || || | || | |||||| | | || ||| || | ||| | Sbjct 80551 CA---TTCACCCCTGAGGAGGTCTCCGCCATGGTTCTGCTCAAGATGCGCGAGACTGCCG 80495 Query 349581 AAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATG 349640 | || || | |||| | || | || || || | ||||| || ||||| || || | Sbjct 80494 AGGCCTACCTCGGTGGCTCCGTCAAGGACGCCGTCGTCACTGTTCCCGCCTACTTCAACG 80435 Query 349641 ATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAA 349700 | | || || || || || || || || | |||||| || | || || | ||| Sbjct 80434 ACTCTCAACGACAGGCTACCAAGGACGCCGGTACCATTGCCGGTCTCAACGTCATGCGAA 80375 Query 349701 TGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAG 349760 | || || || |||||||| || || ||||| || || || || || | | | || | Sbjct 80374 TCATCAACGAGCCCACTGCCGCTGCCATTGCTTACGGTCTCGACAAGAAGGGCGAGGGCG 80315 Query 349761 aaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACAC 349820 | || || |||| || || || || || || || || || ||||| || || || || Sbjct 80314 AGAAGAACGTTCTCATCTTCGACTTGGGAGGAGGCACGTTCGATGTCTCGCTCCTCACCA 80255 Query 349821 TTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 | || ||||| || || || || || || || || ||||| || || | ||||| || | Sbjct 80254 TCGAGGAGGGCATATTCGAGGTCAAGGCCACCGCCGGTGACACCCACTTGGGTGGCGAGG 80195 Query 349881 ATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931 | || || || |||||||| | || ||||| | || || ||||| |||| Sbjct 80194 ACTTCGACAACCGTCTCGTAACCCACTTTGTCCAGGAGTTCAAGCG-CAAG 80145 >seq725 Length=189678 Score = 123 bits (136), Expect = 8e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | || | || ||||| || || || || || || Sbjct 146324 CATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTC 146383 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || || || || || ||||| || ||||| || || || || || || Sbjct 146384 GGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGG 146443 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || | || ||||| || |||| || |||| ||| Sbjct 146444 AGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTC 146503 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| ||||| | ||||| ||||| || || || || || |||||||| Sbjct 146504 AACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| ||||| || || ||||| Sbjct 146552 CATACCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATC 146611 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || ||||| || || || ||||| ||||| || || || || Sbjct 146612 GGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGG 146671 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || | || ||||| || || | || || | || Sbjct 146672 AGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTC 146731 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| || || || || || || Sbjct 146732 AACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 146770 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | || | || ||||| || || || || || || Sbjct 150667 CATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTC 150608 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || || || || || ||||| || || || ||||| ||||| || || Sbjct 150607 GGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGG 150548 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || ||||| || || | || ||||| || || | || || | || Sbjct 150547 AGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTC 150488 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || || || | ||||| || || || || || || Sbjct 150487 AACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 150449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515220696954008