Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq908 266 4e-66 seq966 98.7 1e-15 >seq908 Length=183814 Score = 266 bits (294), Expect = 4e-66 Identities = 477/689 (69%), Gaps = 6/689 (1%) Strand=Plus/Plus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || ||| | || ||||| ||||||||||| || ||||||| ||| Sbjct 169958 AAGTACTTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGCACACCCAACCCTCAAATG 170017 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 || ||||||||||| | |||||||| ||||| ||||| || |||||||| || ||| Sbjct 170018 TCATCATGCTTCCTGGTCACCATGAAGGACGACTCAATCGATGGTATCTACGACACCCTC 170077 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTC 53446 ||| || ||| ||| |||| | | ||||| ||||| || || | | || Sbjct 170078 AAGACCTGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATC 170137 Query 53447 CGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATG 53506 |||| | |||| | || || || ||||| ||| | | || |||||||||||| Sbjct 170138 CGTGGTACCGGCTCGTACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATG 170197 Query 53507 CTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGGG 53565 || ||||||||||||||||| || || |||||| |||||||||| ||||| | ||| Sbjct 170198 CTTCGCGTCTTCAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGT 170257 Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625 | | |||||||||||| | ||||| |||||| | ||| | | ||||| ||||| || | Sbjct 170258 G-CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAG 170316 Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTC 53684 ||| || || | || ||| | || |||||| || || ||| || || ||||| | Sbjct 170317 GAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTAC-GCCCTTTGGATCC 170375 Query 53685 CGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACG 53744 | ||| | |||||| | || || || ||| ||||||| ||||||||||| || Sbjct 170376 CAGACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCCG 170435 Query 53745 AGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACG 53804 |||||||||| ||| | ||||||||| || ||||| | | | || || ||||| Sbjct 170436 AGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACG 170495 Query 53805 CAGTTCAGGGCCGCTACAAGAAGAA-GGTCAAGGCGCGTGAGGTATGGGATGCAATCCTC 53863 | |||| || | | | ||| |||||||| | || | ||| | || | ||| Sbjct 170496 AGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTC 170554 Query 53864 AAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAG 53923 || ||| |||||| || | || | |||| |||||||| | | ||| ||| Sbjct 170555 GAGGCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAG 170614 Query 53924 AGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||||| |||||| ||||| |||||| Sbjct 170615 TCGAACCAAAAGAACCTCGGCACCATCAA 170643 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/203 (71%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTC-TGATTGACATGAGT 55786 |||||| | ||| ||| ||||||||||| | |||||| ||| | || |||||| | Sbjct 171414 TCAAGGCACTGTACAAGACAGTGTGGGAGATCTCGCAGAAG-GTCATCATCGACATGGCT 171472 Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGA-GAATCC 55845 || || || ||||| | ||| ||| || || |||||||||| | | | | | || Sbjct 171473 GCCGACCGAGGTGCCTTTATCTGCCAATCTCAAAGTCTGAACATCCACCTCCAAGCACCC 171532 Query 55846 TTCACTGGCCAAGTT--GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACG 55903 | |||||| || |||| |||||||| ||||| |||||||||||| | |||||| Sbjct 171533 AGCTTTGGCCAGCTTACGAGC---ATGCACTTCTACGGCTGGAAGAAGGGATTGAAGACG 171589 Query 55904 GGTATGTACTATCTGCGGACCCG 55926 || | ||||| || || ||||| Sbjct 171590 GGAACATACTACCTCCGAACCCG 171612 >seq966 Length=49847 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/203 (72%), Gaps = 8/203 (4%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTG--GCCGCATCCTTGCCACC--TGCCAGCCGCGTTCCAAA 152084 ||||| ||||| || ||||| ||||| ||||||||||| || || || || || || Sbjct 24951 GTGAAAATGTAACG--AGCTGAGGCCGCGTCCTTGCCACCCATGGCA--CGAGTGCCGAA 24896 Query 152085 CTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 ||| || ||| |||||| |||| ||||| ||||| ||| | ||||||||||| Sbjct 24895 CTGACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATT 24836 Query 152145 CACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTA 152204 ||||||||| |||||||| || ||||| || || || || ||||| | | || Sbjct 24835 TACAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATA 24776 Query 152205 TCCCGCCAACTGCGCCACCTTCA 152227 || ||||| || || |||| || Sbjct 24775 ACCAGCCAATTGGGCAACCTGCA 24753 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/201 (70%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAG--ACGCGTACCGAATT 117362 |||||||||||||||| || || ||||||||||| || | ||| || ||||| | Sbjct 24951 GTGAAAATGTAACGAGCTGAGGCCGCGTCCTTGCCACC--CATGGCACGAGTGCCGAACT 24894 Query 117363 GTCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 | || | || | | || ||| ||||| ||||| |||| ||||||||| || | Sbjct 24893 GACCGATGGGGGCGAGGATGTTGGCATTGTTCGCGCCGCAGAAGTCTTGAGCCAAATTTA 24834 Query 117423 CAATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGC 117482 ||||||| ||| || || ||| || || || || || || ||||| |||| || | Sbjct 24833 CAATCGTGGATTGCAGACTTTGCTCGCCGTGATGGTATGCGGTGTGCTCGCCCACATAAC 24774 Query 117483 CCGCCAGCTGAGCCACCTTCA 117503 | |||| || || |||| || Sbjct 24773 CAGCCAATTGGGCAACCTGCA 24753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204125412800