Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq725 129 4e-25 seq1576 109 3e-19 seq1017 86.0 4e-12 >seq725 Length=189678 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | ||||| || || ||| ||| || || ||||| ||||| ||| Sbjct 146100 CCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 146159 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || | || || ||||| || || | ||||||||||||||| || Sbjct 146160 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGA 146219 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| ||||| || ||| || ||| |||||| |||||| || Sbjct 146220 ATGCCCTCCTTGTCTTGGATC-TTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGAC 146278 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || ||||| | || || || || |||||||| Sbjct 146279 TTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 120 bits (132), Expect = 2e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | || |||||| ||||||||| ||||| ||||| ||| Sbjct 150891 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAA 150832 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || |||| || || || || ||||| || || | ||||| |||||||| || Sbjct 150831 AGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 150772 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || || || || | ||| |||||| |||||| || Sbjct 150771 ATGCCCTCCTTGTCTTGGATC-TTGGTCTTGACATTGTCAATGGTGTCTGAGCTCTCGAC 150713 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || ||||| | || || || || |||||||| Sbjct 150712 TTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150665 Score = 113 bits (124), Expect = 3e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | |||||||| |||||| ||||||||||||||| || || || Sbjct 151120 GCCACCACGAAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGA 151061 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || ||||||| || || || || || || || || |||||||||||||| || Sbjct 151060 AAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGG 151001 Query 34599 CACTCCCTCCTTGTC 34613 | ||||||||||| Sbjct 151000 AATGCCCTCCTTGTC 150986 Score = 109 bits (120), Expect = 3e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || |||||| |||||| || ||||| ||||| ||||| || || Sbjct 145881 AGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGG 145940 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || | || || ||||| || || || || ||||||||||| || | |||||| Sbjct 145941 CCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCC 146000 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || || || || | || ||||| ||||||||| || | || Sbjct 146001 TTGTCCTGGATC-TTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGT 146059 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || ||||| || |||||||| Sbjct 146060 GATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 109 bits (120), Expect = 3e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || || ||| ||||||||| ||||| ||||| ||||| || || |||| || Sbjct 146574 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 146633 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 ||||| || ||||| || || | ||||||||||||||| || | |||||||||||| | Sbjct 146634 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 146693 Query 34618 ATCTT 34622 ||||| Sbjct 146694 ATCTT 146698 Score = 104 bits (114), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||| |||||| ||||||||||||||| || || || || || || Sbjct 145653 AGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGG 145712 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| || || || ||||| || || || ||||| |||||||| || | |||||| Sbjct 145713 CCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCC 145772 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| ||| || || || || | ||| |||||| ||||| || | || Sbjct 145773 TTGTC-CTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGT 145831 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| | || || || || |||||||| Sbjct 145832 GATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | ||||| || | ||| |||||| || ||||| || || || Sbjct 146328 CCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAG 146387 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||||||||||| || Sbjct 146388 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGG 146447 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || || || || | || |||||| || || Sbjct 146448 ATGCCCTCCTTGTCTTGGATC-TTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAAC 146506 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | || || || || ||||| | || || || || |||||||| Sbjct 146507 TTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 82.4 bits (90), Expect = 5e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | ||||| || | ||| |||||| || ||||| || || || Sbjct 150663 CCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAG 150604 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| |||| || || || || ||||| || || | |||||| |||||||| || Sbjct 150603 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGG 150544 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 150543 ATGCCCTCCTTGTCCTGGATCTT 150521 >seq1576 Length=101731 Score = 109 bits (120), Expect = 3e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||||| | || | ||||| ||| || ||||| ||||| || || || Sbjct 30305 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30246 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || ||||| ||||||| || || || ||||| || || | ||| |||||||| || || Sbjct 30245 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 30186 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || || || ||| | ||| ||||| | ||| || Sbjct 30185 ATGCCCTCCTTGTCTTGGATC-TTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 30127 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGAT 34712 || | ||| || || || || || | || || ||||| ||||||||| |||| Sbjct 30126 CTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCATGATGAT 30073 >seq1017 Length=42706 Score = 86.0 bits (94), Expect = 4e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| || |||||| |||||| || ||||| || || || || || || |||| || Sbjct 11199 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 11258 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 || || || ||||| || || | ||||||||||||||| || | || |||||||| | Sbjct 11259 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGG 11318 Query 34618 ATCTT 34622 ||||| Sbjct 11319 ATCTT 11323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722941108488