Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq725 140 3e-28 seq694 114 1e-20 >seq725 Length=189678 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| |||| ||||| ||||| || || Sbjct 146326 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 146267 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||| || |||||||| || ||||| || || || ||| Sbjct 146266 GACACCATTGATAACGTGAAGACAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAA 146207 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||| || | ||| |||| ||||||||| Sbjct 146206 CAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACAAC 146147 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || ||||| | ||| | || ||||| || Sbjct 146146 ATCCAGAAAGAGTCCACCCTTCACTTGGTCCTCCGTCTTCGCGGTGGTAT 146097 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || || |||||| | || Sbjct 145870 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 145811 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || ||||| ||||| || ||||| || || || || Sbjct 145810 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 145751 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||||||| || | ||||| | || | || || |||||| Sbjct 145750 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCTGACTACAAC 145691 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||||||||||| || | |||||||| | ||| | || |||||| Sbjct 145690 ATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGTCTCCGCGGTGGC 145643 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| | || || || || || ||| | || Sbjct 150893 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGAATCATCA 150952 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||| ||||| || ||||| || || || ||| Sbjct 150953 GACACCATCGACAACGTGAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 151012 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||| ||||| || | |||||| | ||| |||| || |||||| Sbjct 151013 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAAC 151072 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 |||||||||||||| || | |||||||| | ||| | || |||||| Sbjct 151073 ATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGTCTTCGTGGTGGC 151120 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | || || || || ||||| ||| Sbjct 146098 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCC 146039 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | || || || || || ||||| || ||||| || || || ||| Sbjct 146038 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 145979 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||||||||| || ||||| || | ||| |||||||||||||| Sbjct 145978 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 145919 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || ||||| | ||| | || ||||| || Sbjct 145918 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGGTAT 145869 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || |||||||| |||||| | || || || || || || | || ||| | || || Sbjct 146770 GTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGAC 146711 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || |||||||| || ||||| || || || ||||||||| | || Sbjct 146710 AATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATC 146651 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | ||||||||| ||| | || ||| | ||| |||||||||||||||| ||||||||| Sbjct 146650 TTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAG 146591 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | || ||||| | || |||| ||||| || Sbjct 146590 TCCACACTGCACTTGGTCCTCCGCCTGCGTGGTGGTAT 146553 Score = 122 bits (134), Expect = 8e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || ||||||||| |||| ||||| ||||| || || Sbjct 150665 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 150724 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || |||||||| || ||||| || || || || Sbjct 150725 GACACCATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAG 150784 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| || | || ||| | ||| |||| ||||||||| Sbjct 150785 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTTCTGATTACAAC 150844 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || ||||||||||| || | || | || | ||| | || ||||| || Sbjct 150845 ATCCAAAAGGAGTCCACTCTTCACCTTGTCCTCCGTCTTCGCGGTGGTAT 150894 >seq694 Length=64764 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| || ||| |||| || || || ||||| | || Sbjct 29765 CATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTC 29706 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||||| || || ||||| ||||| || ||||| ||||| || || || || || Sbjct 29705 CGACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCA 29646 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| || | || ||| | || |||| || ||||| Sbjct 29645 ACAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 29586 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 29585 CATCCAGAAGGAGTCGAC 29568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434908962270720