Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq725 87.8 1e-12 >seq725 Length=189678 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || ||||| ||||| || || || || ||| | || || || ||| || Sbjct 146098 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCC 146039 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || || || || ||||| || || |||| ||| | Sbjct 146038 GACACGATCGACAAT--GTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 145981 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || || || ||||| || || ||||| || | |||| | | |||||||||| Sbjct 145980 AACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACA 145921 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| || ||| |||| | || ||||| | ||| | || || || Sbjct 145920 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGG 145872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355854870841272