Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq725 113 3e-20 >seq725 Length=189678 Score = 113 bits (124), Expect = 3e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 |||||| || || || || || || ||||| ||||| ||||| ||| ||||||| | || Sbjct 146771 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 146712 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || || | || || || ||||||||| | | Sbjct 146711 CAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 146653 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || |||||||| ||||| || |||| ||||| | |||||||||||| ||||| | Sbjct 146652 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGG 146593 Query 23801 AGTCCACATTACATTTAGT 23819 |||||||| | || || || Sbjct 146592 AGTCCACACTGCACTTGGT 146574 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || |||||||||||||| || | | Sbjct 146326 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 146267 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || | || ||||| | | ||||| || || | || || || || Sbjct 146266 GACACCATTGATAACGTGAAGACAAAGA-TCCAAGACAAGGAGGGCATTCCTCCGGACCA 146208 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || || |||||||| || |||| || | ||||| | |||||||| Sbjct 146207 ACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACAA 146148 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 146147 CATCCAGAAAGAGTCCAC 146130 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || |||||||||||||| || | | Sbjct 150665 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 150724 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || || || | | ||||| || || | || || || || Sbjct 150725 GACACCATTGACAATGTCAAGACCAAGA-TCCAAGACAAGGAGGGCATTCCTCCGGACCA 150783 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || |||||||| || || || |||| |||||| | |||||||| Sbjct 150784 GCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTTCTGATTACAA 150843 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 150844 CATCCAAAAGGAGTCCAC 150861 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||| ||||||||||| || | Sbjct 146554 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 146495 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || || ||||| || || | || || || || Sbjct 146494 GACACGATCGACAATGTCAAGAC-CAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 146436 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || ||||| || || || || |||| || || | ||| ||||| Sbjct 146435 ACAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 146376 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||||||||| || || ||| Sbjct 146375 CATCCAGAAGGAGTCCACATTGCACTTGGTT 146345 Score = 93.3 bits (102), Expect = 3e-14 Identities = 142/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 23622 CGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA 23681 ||| || || || || || || || ||||| ||||| ||||| ||| |||||||| | || Sbjct 150448 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 150507 Query 23682 -AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || || || | | ||||| || || | || || || || |||||| | | Sbjct 150508 CAATGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTA 150566 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | || ||||| || || || || |||| || || | ||| |||||||| || || | Sbjct 150567 TTTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGG 150626 Query 23801 AGTCCACATTACATTTAGTT 23820 |||||||||| || || ||| Sbjct 150627 AGTCCACATTGCACTTGGTT 150646 Score = 89.7 bits (98), Expect = 3e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || ||||| || || || ||||| ||||| || || | | Sbjct 146098 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCC 146039 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || || || | | ||||| || || | || || || || Sbjct 146038 GACACGATCGACAATGTAAAGACCAAGA-TCCAGGACAAGGAGGGCATTCCTCCGGACCA 145980 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || || |||||||| || |||| || | ||||| | ||||||||| Sbjct 145979 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 145920 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || |||||||| Sbjct 145919 CATCCAGAAGGAGTCCAC 145902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002448561888