Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq214 109 5e-19 >seq214 Length=80960 Score = 109 bits (120), Expect = 5e-19 Identities = 275/414 (66%), Gaps = 8/414 (2%) Strand=Plus/Plus Query 4284 AAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCG 4343 ||||| || || ||||||| | ||| || || ||||| || || || ||||| || ||| Sbjct 11251 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 11310 Query 4344 TTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATAC 4403 ||||| || || || | || ||||| |||| ||||||||| |||||||| || ||| Sbjct 11311 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 11370 Query 4404 TGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACA-GGTAGCGCGTATGTCAAAAA 4462 |||||||| ||| ||| || || || ||| ||| || || || | |||| || Sbjct 11371 TGGCTCATAAGTCGTGCGTTCATGCCGATCAAT-GAACAGGGAAGAGCATCGGTCAGGAA 11429 Query 4463 CTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC---TTTAGATGG 4519 | || || || || || | || | || || | ||| | | | Sbjct 11430 AGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGGTGCGGCCG 11489 Query 4520 TTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCT 4579 || || | || | || | || || ||||| || |||| ||| ||||||| Sbjct 11490 CTTCTT---GAGGTGGCTGAAGAGCAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCG 11546 Query 4580 GCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAA 4639 ||| || || ||||| || || || | |||||||| | ||| | ||| || ||||| || Sbjct 11547 GCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAA 11606 Query 4640 TATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTAC 4693 || | ||| || || || || ||||| || || |||||||| ||||| || || Sbjct 11607 GATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAAC 11660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427040564698088