Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq214 104 3e-17 >seq214 Length=80960 Score = 104 bits (114), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| || || ||||| || |||| || || | ||||| || || ||| Sbjct 11512 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 11571 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||||||||| || ||||| || |||||||| || || | |||||||| || || ||| Sbjct 11572 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 11631 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTG 48314 || || || |||||||| ||||| || || | ||| | | ||| | |||| | Sbjct 11632 AAGATACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCG 11691 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 | ||||| || | ||||| || ||||| | ||| || Sbjct 11692 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGAC 11729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694653725687040