Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_031091.1 Length=43277 Score E Sequences producing significant alignments: (Bits) Value seq338 84.2 6e-12 >seq338 Length=1336 Score = 84.2 bits (92), Expect = 6e-12 Identities = 190/281 (68%), Gaps = 11/281 (4%) Strand=Plus/Plus Query 9365 CGTTTCGGTGGTGGCCCGGCGCAACGGCGTCAATGCCAATCAACTATTTCAC-TGGCGCA 9423 ||| ||| | || ||||| ||| |||| | || ||||| || || || ||| ||||| Sbjct 197 CGTCTCGCTCGTCGCCCGCCGCCACGGGCTGAACGCCAACCAGCTGTT-CACGTGGCGTC 255 Query 9424 AGCTTTACCAGGACGGAAGTTTGTCGGCGGTCAGCGCCGGTGAAGCCGTGGTGCCTGCGT 9483 ||| || ||| || |||| | | | |||||||||| |||||||| || | Sbjct 256 GGCTGATGGAGCGCGGCGCGTTCACGGCCGCCGGTGCCGGTGAAGAGGTGGTGCCAGCCT 315 Query 9484 CCGAGTTGAGCGATGCGCTCAGGCAGATTCGTGAGCTACAACGGATGCTGGGCAAGAAGA 9543 ||||| | | | ||| | |||||| |||||||| || ||| | ||||||||||||| Sbjct 316 CCGAGCTTCGTGTTGCCCAGCAGCAGATCCGTGAGCTGCAGCGGCTCCTGGGCAAGAAGA 375 Query 9544 CGATGGAAGCCGAAGTCCTCAAAGAGGCCGTGGAGATAG--CCCGCTCGCGAAAATGGAT 9601 || | || |||| |||| ||||| ||||| | |||| | | |||| | Sbjct 376 CGCTCGAGACCGAGATCCTGCGCGAGGCGATGGAGCGGGTTGCCGCCCCCAAAAA---GT 432 Query 9602 TGCGCACTCAC----CCTTGTTGCCGGGGGACGGTCAGTGA 9638 ||| | | | | ||| || |||||||||||| | |||| Sbjct 433 TGCCCTCGCGCGTGACCTCGTGGCCGGGGGACGGCCGGTGA 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138361947609648