Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq725 163 7e-35 seq1576 120 7e-22 seq694 116 9e-21 seq1017 95.1 3e-14 >seq725 Length=189678 Score = 163 bits (180), Expect = 7e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| |||||||| ||||| ||||||||||||||||| | | || | || || Sbjct 150877 GAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTC 150818 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | || || ||||| || Sbjct 150817 CTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 150758 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | ||||||| ||||| ||||| ||||| ||||| Sbjct 150757 TTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGT 150698 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 150697 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150665 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | ||||| || |||||||| |||||||||||||| | | || | ||||| Sbjct 146114 GAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATC 146173 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || | || ||||||||||| || | ||| ||||||| | || || ||||| || Sbjct 146174 CTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTC 146233 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || ||| || || | || | | ||||||| ||||| ||||| ||||| ||||| Sbjct 146234 TTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGT 146293 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 146294 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 138 bits (152), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | ||||||||| ||||| ||||| |||||||| || | | ||| | Sbjct 145652 GAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCG 145711 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || ||||||||||| | | ||||||||||| | ||| || || Sbjct 145712 GCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTC 145771 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || |||||| | || | | ||||||| || || || || || Sbjct 145772 CTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGT 145831 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||||| |||||| Sbjct 145832 GATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| ||||| || |||||||||||||||| | || | Sbjct 145880 GAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 145939 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | || ||||||||||| | | || ||||||| | || || || Sbjct 145940 GCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTC 145999 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | |||| || ||||| || || || || Sbjct 146000 CTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGT 146059 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||||||||||||||||| |||||| Sbjct 146060 GATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 120 bits (132), Expect = 7e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || ||||||||||| |||| | |||| || || || || ||||| | Sbjct 146358 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTT--C 146415 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 ||||||||||||| | ||| ||||||| | ||| || ||||| ||||| || || | Sbjct 146416 CGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCT 146475 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 ||||| | || | ||||||| || ||||| || || || || ||||| ||||| | Sbjct 146476 TGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGG 146535 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||| ||||||| |||||| Sbjct 146536 TCTTGACGAAGATCTGCAT 146554 Score = 107 bits (118), Expect = 4e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||||| ||||||||||||||||||| | || | || || Sbjct 146570 GAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTC 146629 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||| ||||||| | ||| || ||||| || Sbjct 146630 CTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTC 146689 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | |||| || ||| || || || || || || Sbjct 146690 TTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGT 146749 Query 152072 TTTGCCCGTGAGAGTCTTCACG 152093 ||||| || |||||||| ||| Sbjct 146750 CTTGCCAGTCAGAGTCTTAACG 146771 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || ||||||||||| |||| | |||| || || || || ||||| | Sbjct 150633 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTT--C 150576 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 ||||||| ||||| | ||||||||||| | ||| || ||||| || || || || | Sbjct 150575 CGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCT 150516 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 ||||| | || | |||| || ||| || || || || || || ||||| || |||| Sbjct 150515 TGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAG 150456 Query 152086 TCTTCACG 152093 |||| ||| Sbjct 150455 TCTTGACG 150448 >seq1576 Length=101731 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || || ||||||||||||||||| |||| || |||| Sbjct 30297 GAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCG 30238 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | || ||||| | | ||| || || Sbjct 30237 GCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTC 30178 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || |||||| || || || Sbjct 30177 CTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGT 30118 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| || |||| |||||| Sbjct 30117 GATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 30079 >seq694 Length=64764 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || ||||| ||||| || ||||||||||| || | | ||| | || || Sbjct 29553 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 29612 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||| ||||||| | ||| |||||||| || Sbjct 29613 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCC 29672 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||| | || | | ||| ||| ||| || || || || ||||| Sbjct 29673 TGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 29732 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| ||||||| |||||| Sbjct 29733 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 29764 >seq1017 Length=42706 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | |||||||| ||||| || ||||||||||| |||| | || | || || Sbjct 11195 GAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTC 11254 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||| ||||||| | || |||||||| || Sbjct 11255 CTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTC 11314 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | ||| || ||| || || || || || || Sbjct 11315 CTGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGT 11374 Query 152072 TTTGCCCGTGAGAGTCTTCACG 152093 ||||| ||||| ||||| ||| Sbjct 11375 CTTGCCGGTGAGGGTCTTGACG 11396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153795136140856