Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq725 165 2e-35 seq1576 156 1e-32 seq694 145 2e-29 seq1017 131 4e-25 >seq725 Length=189678 Score = 165 bits (182), Expect = 2e-35 Identities = 157/201 (78%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| |||||||||||| |||||| Sbjct 145867 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCAGAC 145808 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||||||||| || || ||||| ||||||||||| Sbjct 145807 ACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 145748 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || |||||||||||||| | ||||| | || || ||| | Sbjct 145747 CGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCTGACTACAACATT 145688 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 145687 CAAAAGGAGTCCACTCTTCAT 145667 Score = 165 bits (182), Expect = 2e-35 Identities = 160/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||||||||| Sbjct 150668 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCAGAC 150727 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| ||||| || ||||| || || || |||||||||||||| Sbjct 150728 ACCATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAGCAG 150787 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || ||| | || ||| | ||||| ||| || Sbjct 150788 CGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTTCTGATTACAACATC 150847 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || ||||| Sbjct 150848 CAAAAGGAGTCCACTCTTCACCTTGT 150873 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| |||||||| || || || ||||| ||||||||||| ||||| ||| Sbjct 146095 CAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCCGAC 146036 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || || ||||||||||| ||| Sbjct 146035 ACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 145976 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| || ||| | || ||||| | || ||| ||||||| ||| || Sbjct 145975 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 145916 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 145915 CAGAAGGAGTCCACTCTTCA-CTTG 145892 Score = 158 bits (174), Expect = 3e-33 Identities = 154/197 (78%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| ||||||||||| Sbjct 146771 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 146712 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| || ||||| || || |||||||||||||| || || || || Sbjct 146711 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 146652 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || || ||||| || || | || ||| ||||||| ||| ||||||| || Sbjct 146651 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGA 146592 Query 178112 ATCAACACTGCATCTTG 178128 || |||||||| |||| Sbjct 146591 GTCCACACTGCA-CTTG 146576 Score = 154 bits (170), Expect = 4e-32 Identities = 155/200 (78%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || ||||| || || || || |||||||||||||| || ||| ||||| ||||| Sbjct 150448 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 150507 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 || ||||| ||||| |||||||| || || ||||||||||||||||| || ||||| Sbjct 150508 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTAT 150567 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||||| |||||||| || || | || || |||| || ||| |||| || || Sbjct 150568 TTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGA 150627 Query 178112 ATCAACACTGCATCTTGTTT 178131 || ||| |||| |||| || Sbjct 150628 GTCCACATTGCA-CTTGGTT 150646 Score = 150 bits (166), Expect = 4e-31 Identities = 157/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || || ||||||||| Sbjct 146323 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCAGAC 146264 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||| || ||||| || || || ||||||||||| || Sbjct 146263 ACCATTGATAACGTGAAGACAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAACAG 146204 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||| | || ||||| | || ||| | ||||| ||| || Sbjct 146203 CGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACAACATC 146144 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 146143 CAGAAAGAGTCCACCCTTCA-CTTG 146120 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| ||||| || ||| |||||| Sbjct 146551 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 146492 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| || ||||| || || |||||||||||||| || Sbjct 146491 ACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAG 146432 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||||||||| |||||||| || || | || || |||| || ||| || Sbjct 146431 CGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATC 146372 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131 || || || || ||| |||| |||| || Sbjct 146371 CAGAAGGAGTCCACATTGCA-CTTGGTT 146345 Score = 150 bits (166), Expect = 4e-31 Identities = 154/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| |||||||| ||| |||||| Sbjct 150896 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGAATCATCAGAC 150955 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || || ||||||||||| || Sbjct 150956 ACCATCGACAACGTGAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAG 151015 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||| || || ||||||||||| || | || ||| | || || ||| | Sbjct 151016 CGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAACATT 151075 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| || || || || ||| Sbjct 151076 CAAAAGGAGTCCACTCTTCAT 151096 >seq1576 Length=101731 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || |||||||| || || |||||||||||||| || ||| ||| Sbjct 30082 CAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCCGAC 30141 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || |||||||| ||||| || ||||| || || ||||| || ||||| ||| Sbjct 30142 ACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAA 30201 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || || |||| || ||| || Sbjct 30202 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAACATC 30261 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||||||||| || || || || || Sbjct 30262 CAAAAAGAATCCACCCTCCACCTCGT 30287 >seq694 Length=64764 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || ||||||||||||||||| || ||| Sbjct 29761 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 29702 Query 177984 ACCATCGAGAACGTCAA-ACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCA 178042 ||||||| |||||| || ||| || |||||||| ||||| ||||| |||||||| || Sbjct 29701 TCCATCGACGCCGTCAAGACCAAA-ATCCAGGACAAGGAAGGTATCCCCCCGGACCAACA 29643 Query 178043 ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGT 178102 ||||| ||||||||||| || |||||||| || || | |||||| | || || ||| | Sbjct 29642 GCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACAT 29583 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || || || || || Sbjct 29582 CCAGAAGGAGTCGACTCTCCACCTCGT 29556 >seq1017 Length=42706 Score = 131 bits (144), Expect = 4e-25 Identities = 148/197 (75%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 177932 CGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGA 177991 ||| || || ||||| || || ||||||||||||||||| || || ||| ||||||| Sbjct 11396 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11337 Query 177992 GAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTAT 178051 |||||| ||||| |||||||| ||||| || || |||||||| || || || || Sbjct 11336 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCAT 11277 Query 178052 CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111 ||||||||| || |||||||| || || | || || |||| || ||| |||| || || Sbjct 11276 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGA 11217 Query 178112 ATCAACACTGCATCTTG 178128 || || || || |||| Sbjct 11216 GTCCACTCTTCA-CTTG 11201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203704426008784