Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq444 102 2e-16 seq356 95.1 3e-14 >seq444 Length=195309 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 319804 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 319861 ||||| || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 43687 TCGGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 43630 Query 319862 ACCCTTCAAGCTGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTG 319921 | || || | ||| |||||| ||| |||||||| ||||| || || || | ||||| Sbjct 43629 AACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTAC 43570 Query 319922 GCCCACACAGACCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAA 319981 | ||||| |||||||| |||| || || || ||| || | | |||| ||||||| Sbjct 43569 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 43510 Query 319982 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 43509 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 43461 >seq356 Length=94465 Score = 95.1 bits (104), Expect = 3e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 230428 GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAA 230487 || ||| |||| ||| | || ||||||||||| ||||||| | |||||||||||| Sbjct 84881 GATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCAGTACATCGAA 84822 Query 230488 TTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAAC 230547 || || || ||||| | | || || || || ||| ||| |||||| | | || Sbjct 84821 TTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGTGAAGCACTACAACGCCACAAAT 84762 Query 230548 CCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTT 230597 ||||| | || |||||| ||| ||||| ||||| ||||| |||||||| Sbjct 84761 CCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 84712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810826124360