Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq866 131 1e-25 seq611 84.2 2e-11 seq279 82.4 6e-11 >seq866 Length=73677 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| |||| |||| |||||||||||||||||||| ||||||| | Sbjct 66131 CCACCGCGGAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGAC 66190 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||||| ||| ||||| || | || | || ||| |||||| || Sbjct 66191 AGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGA 66250 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | |||| Sbjct 66251 ATGCCCTCCTTGTCCTGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACC 66310 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||||||||| | || |||||||| |||||||| Sbjct 66311 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 |||||||||||||| ||||| || || | || || || ||||||| ||||| ||||| Sbjct 66845 GTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 66904 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | ||||| | |||||||||| ||| | || |||||||| |||||| ||| Sbjct 66905 GCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGTCTTC 66964 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | ||| ||||| || || ||||||||||| | || Sbjct 66965 ACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGTGAGGGTC 67024 Query 21159 TTGACAAATATTTGCAT 21175 |||||||| || ||||| Sbjct 67025 TTGACAAAAATCTGCAT 67041 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| || | ||| ||||||||||||||||| ||||| | Sbjct 71251 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAG 71192 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||| |||||| ||| Sbjct 71191 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGA 71132 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| ||||| || |||||| || || | | ||| ||| || || ||| Sbjct 71131 ATGCCCTCCTTATCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACC 71072 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGAC 21163 || | ||| ||||||||||| || | || ||||| Sbjct 71071 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 71037 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| ||||| ||||||||||| || ||||| || || | Sbjct 66587 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAA 66646 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| || || || || || | || || | |||||||||| ||| Sbjct 66647 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 66706 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| ||||| || || | | ||| || || | |||| Sbjct 66707 ATACCCTCCTTGTCCTGAATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACC 66766 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || || ||||||||||| | || ||||| || || ||||| Sbjct 66767 TCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| |||| ||| |||||||| || ||||| || || | Sbjct 66359 CCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAA 66418 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||| ||| ||||| || | || || | ||| |||||| || Sbjct 66419 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 66478 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| |||||| || || | | ||| || || | || | Sbjct 66479 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAACT 66538 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || ||||| || || ||||| Sbjct 66539 TCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| || | ||| ||||||||||||||||| || || | Sbjct 71479 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAG 71420 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || || | ||| || ||| || Sbjct 71419 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGA 71360 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||| || || | | ||| || || | ||| Sbjct 71359 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 71300 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | ||| ||||| || || ||||| Sbjct 71299 TCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||||| || ||| || ||||||| ||||| || || Sbjct 67073 GTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTTCCG 67132 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 || | ||||| | |||||||||| || | ||| |||||||| |||||| Sbjct 67133 GCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 67185 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| |||| || | ||||||||||||||||||||| || || | Sbjct 71707 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAA 71648 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||||| ||| ||||| || | || | || || |||||| || Sbjct 71647 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 71588 Query 21069 ACGCCTTCCTTGTCGGCGATCTT 21091 | ||| |||||||| |||||| Sbjct 71587 ATGCCCTCCTTGTCCTGGATCTT 71565 >seq611 Length=85925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||| | || | || |||||||| || ||||| ||||||| Sbjct 39125 CCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 39066 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || ||||||| ||||| ||||| || | || |||| ||| |||||| ||| Sbjct 39065 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGA 39006 Query 21069 ACGCCTTCCTTGTC 21082 | ||||||||||| Sbjct 39005 ATACCTTCCTTGTC 38992 >seq279 Length=20706 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 20955 CGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTT 21014 |||| || ||| |||| || | |||||||||||| || ||||| ||||| | || || Sbjct 11531 CGCA-CCGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTG 11589 Query 21015 TGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCT 21074 | ||||||| ||||| ||||| || | || || | ||| |||||| ||| | ||| Sbjct 11590 CGACCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCT 11649 Query 21075 TCCTTGTCGGCGATCTT 21091 |||||||| |||||| Sbjct 11650 TCCTTGTCCTGGATCTT 11666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422254197811952