Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq356 221 1e-52 seq445 138 1e-27 seq866 132 5e-26 seq611 131 2e-25 seq279 131 2e-25 >seq356 Length=94465 Score = 221 bits (244), Expect = 1e-52 Identities = 340/480 (71%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 ||||||| ||||| || || |||||| | |||||||||||||| |||||||||||| Sbjct 85213 ACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCA 85154 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 || | || || | || | |||||||||||| ||||| || ||||| |||||| ||| Sbjct 85153 ACGACGAGGACTCCACTTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCT 85094 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || ||| ||||||| |||| || ||||||||||| || || ||||||||||| | Sbjct 85093 TCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTC 85034 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | || ||| ||||||||||||| | | |||||||||||||| ||||||||| || | Sbjct 85033 TCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCT 84974 Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||| |||| || | | |||| ||| | | | ||| | ||| | ||| Sbjct 84973 TGCTCTTCAGCCACCTCAAGAAGCGGCCGCACCCCGATGTCGTTCTGCGCATCATTGCCG 84914 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGCGTCTGCTGGGA 117310 | | ||| |||| |||||| ||||| ||||| || | | || || | | || | || Sbjct 84913 AGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCAT-TGATCGGC 84855 Query 117311 CTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || || || ||| || |||||||| || ||||| ||| | |||||| | | Sbjct 84854 ATGAA-CGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTGGTAGC 84796 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | || |||||||||||| | | || || | ||||| ||| | |||||| Sbjct 84795 CCTCGGGAACGTGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTC 84736 Score = 203 bits (224), Expect = 3e-47 Identities = 188/235 (80%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||| | ||||||| | ||||| Sbjct 85608 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCCGAGGAGATCGACCTC 85549 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||||| | ||||||||||||||||| || ||||||| Sbjct 85548 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 85489 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || || ||||| || ||||||||||||||||| || |||||||| Sbjct 85488 CACGTCCTCGCATTCTTTGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCGG 85429 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| |||||| |||| |||| || ||||| || |||||||||||||| || ||| Sbjct 85428 TTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 85375 >seq445 Length=91251 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || || || || Sbjct 7484 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 7543 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| |||||||||||| | ||||| Sbjct 7544 GACACCATTGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCA 7602 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 7603 ACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAA 7662 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || | || || || || || Sbjct 7663 CATCCAAAAAGAATCGACCCTCCACCTCGT 7692 >seq866 Length=73677 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| |||||||| |||| || || | | Sbjct 66357 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCA 66298 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| ||| |||| ||||| |||||||| || ||||||| Sbjct 66297 GACACCATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 66238 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| ||||| ||| |||| |||| |||||||| ||||||||| Sbjct 66237 CAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAAC 66178 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 || || |||||| |||| ||||| Sbjct 66177 ATTCAAAAGGAGTCCACACTGCA 66155 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 66585 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCA 66526 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||||||||| ||||||| Sbjct 66525 GACACGATCGACAACG-TAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 66467 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| ||||| ||| |||| || | |||||||| ||| ||||| Sbjct 66466 ACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 66407 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || ||||| Sbjct 66406 CATCCAGAAGGAGTCAACTCTGCA 66383 Score = 131 bits (144), Expect = 2e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| || || | | Sbjct 66813 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAGGTGGAGTCATCA 66754 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| ||||| |||||| ||||||| Sbjct 66753 GACACCATCGACAACG-TAAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCA 66695 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || || || || |||| |||||||| ||| ||||| Sbjct 66694 GCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAA 66635 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| |||| |||| Sbjct 66634 CATCCAGAAGGAGTCCACATTGCA 66611 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| | || || || || |||||| | | | Sbjct 67258 CGTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCCGACACCATTGA 67199 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| ||||||||||| |||||||||| || || || Sbjct 67198 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTAT 67139 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| || || ||||| || |||| || || | |||||||||||||||||||| Sbjct 67138 CTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGA 67079 Query 40881 GGCCACGCTGCATCTAGT 40898 | |||| || || || || Sbjct 67078 GTCCACACTTCACCTTGT 67061 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | Sbjct 71036 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 71095 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | || || |||||||| ||| ||||||| || || ||||| Sbjct 71096 CAATGTCAAGACCAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTCAT 71155 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| || || ||||| || |||| ||||||||| |||||||||||| || ||||| Sbjct 71156 CTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATTCAAAAGGA 71215 Query 40881 GGCCACGCTGCA 40892 | | || || || Sbjct 71216 GTCTACTCTTCA 71227 Score = 105 bits (116), Expect = 7e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || ||||| | || || || | | Sbjct 67041 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAGACAATCACGCTGGAAGTTGAGTCATCA 66982 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| |||||| ||||||| Sbjct 66981 GACACGATCGACAACG-TGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 66923 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 66922 GCAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 66863 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||| |||| || || || || Sbjct 66862 CATCCAAAAGGAGTCCACCCTCCACCTTGT 66833 >seq611 Length=85925 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || |||||| |||| || || | || Sbjct 38899 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 38958 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | ||||| ||||||| ||||| || || || ||| ||||||| Sbjct 38959 GACTCCATCGACGCCGTCAAGACCAAAATTCAGGACAAGGAAGGTATTCCCCCGGACCAA 39018 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 39019 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 39078 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| | ||| || | || || Sbjct 39079 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTTCGCCTGCGTGGTGG 39125 >seq279 Length=20706 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || ||||| ||||| || |||||| |||| ||||| | ||||| | | | Sbjct 11739 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11680 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| || || |||||| ||||||| || || ||||| Sbjct 11679 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCAT 11620 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| ||||| || |||| ||||| ||| ||||||||||||||||||||| Sbjct 11619 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGA 11560 Query 40881 GGCCACGCTGCA 40892 | |||| || || Sbjct 11559 GTCCACTCTCCA 11548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515212940086720