Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq130 136 8e-27 >seq130 Length=41321 Score = 136 bits (150), Expect = 8e-27 Identities = 436/668 (65%), Gaps = 15/668 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || || ||| || ||||| || || | |||||| ||| || || Sbjct 36736 TTCAAGACCCTCGAGCGCTCCTATCTGCTGCGCATCAACGGCAAGGTCGCCGAGCGCCCC 36795 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA-GAGCGTGCT 248951 || |||||| | |||||||| |||||||| || ||| | | ||| || ||| | | Sbjct 36796 CAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAG-GCCAT 36854 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||| || |||| | ||| || | | || |||||| | || || |||||||| Sbjct 36855 CGACACTTACAACCTCATGTCGGAGAAGTACTTCACCCATGCCTCCCCCACCCTCTTCAA 36914 Query 249012 CGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 ||| ||||| |||| ||| || |||||||| || | ||||| | |||||||| Sbjct 36915 CGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACGACTC 36974 Query 249072 TGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 |||| ||||| || ||||| || || || || | | ||| || || || | Sbjct 36975 GATCGATGGCATCTACGACACTCTCAAGACCTGCGCC-ATGATCAGCAAGACGGCTGGTG 37033 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | ||||| ||| | || | |||||| | | || || ||||| || || || | Sbjct 37034 GCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATACATTGCCGGAACTAACG 37093 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | ||| | | |||||||| || | ||||| ||| | ||||||| | | | || Sbjct 37094 GTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCCCGCTACGTCG 37153 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||| | | || | |||||||| || | || |||||| Sbjct 37154 ACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGCCCTGGCACT 37210 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || |||||||| ||| | | |||||| ||||||| ||| | |||| | Sbjct 37211 CTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCC 37270 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 |||| |||||||||| ||| ||| || | |||||||||||| || ||| | ||| Sbjct 37271 GTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAACAAAACG 37330 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGCC 249483 | || ||| |||| | | || |||| ||||||| ||| ||| | |||||| | Sbjct 37331 GAGAATGGTCGCTGATGTGCCCCGCCGAGTGCCCCGG-TCTCGCTGATGTCTACGGCGAC 37389 Query 249484 GACTTCGA 249491 || ||||| Sbjct 37390 GAATTCGA 37397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073753027581696