Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq866 143 2e-29 seq611 114 1e-20 seq279 107 2e-18 >seq866 Length=73677 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| |||||| |||||||||||||| ||| ||| |||| ||| Sbjct 66149 ACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 66208 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| ||||| ||||||||||| ||||| | |||||||||||| | Sbjct 66209 AACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 66268 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | |||| ||||||||| | || || |||||| Sbjct 66269 ATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATGGTCTTG 66328 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 66329 CCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| ||| ||||||||| |||||||| ||| || ||| |||| || Sbjct 66605 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 66664 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||||||||| || | ||||| ||||| || || | ||||||||||||| | Sbjct 66665 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGA 66724 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| ||||||||| | || || |||||| Sbjct 66725 ATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTCTTG 66784 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 66785 CCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||| ||||||||||| ||| || ||| |||| || Sbjct 71461 ACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCG 71402 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| || | |||||||| || ||||| | |||||||||||| | Sbjct 71401 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGA 71342 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| |||||||| | || || |||||| Sbjct 71341 ATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTG 71282 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 71281 CCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||| ||||||||||| ||| || ||| | || ||| Sbjct 71689 ACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 71630 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| ||||| || |||||||| ||||| | |||||||||||| Sbjct 71629 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 71570 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| |||||||| | || || |||||| Sbjct 71569 ATCTTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTG 71510 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| || ||||| ||||| Sbjct 71509 CCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || |||||| ||||||||||||||| || ||| |||| || Sbjct 71233 ACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 71174 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||||||||| || | ||||||||||| || || | |||||||| || Sbjct 71173 AGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCTTGG 71114 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | ||||| ||| ||||| | ||| || |||||| Sbjct 71113 ATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 71054 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||||||||| || Sbjct 71053 CCAGTCAGAGTCTTGAC 71037 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || ||||||||| |||||||| ||| || ||| | || ||| Sbjct 66377 ACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 66436 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 | || || |||||||| || | ||||||||||| ||||| | |||||||||||| Sbjct 66437 AACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 66493 >seq611 Length=85925 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| ||||||||||| || || |||| || || || || |||||||| Sbjct 39090 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 39031 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | ||||||||||| || || | ||| ||||||||| |||||| ||| || || Sbjct 39030 GATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGAATTTTGGTCTTGACGGC 38971 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | ||| | ||||||||| | ||| || ||||| |||||||| ||||| || Sbjct 38970 GTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGAC 38911 Query 45325 AAAGATTTGCATGTTG 45340 ||||| |||||| || Sbjct 38910 GAAGATCTGCATGCTG 38895 >seq279 Length=20706 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||||||| || |||| |||| || Sbjct 11542 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 11601 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || | ||||||||||| || || | ||| ||||||||| Sbjct 11602 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGG 11661 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || || | | | ||| ||| ||||| | ||| ||||||||| Sbjct 11662 ATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 11721 Query 45308 CCCGTCAGAGTCTTCAC 45324 || || || ||||| || Sbjct 11722 CCGGTGAGGGTCTTGAC 11738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070519840412