Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq356 147 3e-30 >seq356 Length=94465 Score = 147 bits (162), Expect = 3e-30 Identities = 185/252 (73%), Gaps = 3/252 (1%) Strand=Plus/Plus Query 49956 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 50015 ||| || || || ||| ||||||||||||||||| || || || |||||||| || || Sbjct 84972 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 85031 Query 50016 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAA 50075 ||| |||||||| || |||||||| || ||||| || ||||| || || || || || || Sbjct 85032 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 85091 Query 50076 GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CT-GTC 50132 |||||| || ||||| || ||||||||||| || | ||| || || ||| | || ||| Sbjct 85092 GAAGATGCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTC 85151 Query 50133 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 50192 | ||||| | ||||| |||||||| | || || || || || || ||||| Sbjct 85152 GTTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGC 85211 Query 50193 ATTAAAGAGATA 50204 | ||||| || Sbjct 85212 GTCGAAGAGGTA 85223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260073034080