Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq130 140 5e-28 seq356 125 1e-23 >seq130 Length=41321 Score = 140 bits (154), Expect = 5e-28 Identities = 312/463 (67%), Gaps = 8/463 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || ||||| || | ||| ||||| | || || |||||| | ||| Sbjct 37156 CAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 37215 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| ||| || |||| |||||| | || Sbjct 37216 GTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAG 37275 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AAC--GACGGTGGC 97052 | || || || || ||| | || || |||||||||||||| ||| ||| |||| | Sbjct 37276 CTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAACAAAACGGAG-- 37333 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | ||| || |||||||||| | || |||||||| | ||| || ||||| || Sbjct 37334 -AATGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAA 37392 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGTCGATGC 97171 || ||||| ||| | ||||||| ||||| || | | | || ||| | || Sbjct 37393 TTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGC 37451 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | | || ||| | ||| | | ||| ||| |||||||| | || | ||| || Sbjct 37452 TCAAAAGCTTTGGTACGCCGTTCTCGAGGCCCAGACGGAGACTGGCAACCCTTTCATGCT 37511 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||| | | || ||||| |||||| || | || ||||||||| |||| Sbjct 37512 TTACAAGGACGCTGCCAACCGCAAGTCGAACCAAAAGAACCTCGGTACCATCAAGTGCTC 37571 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 ||| ||||||||||| || | |||||| | ||||||| ||| Sbjct 37572 CAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAG 37614 >seq356 Length=94465 Score = 125 bits (138), Expect = 1e-23 Identities = 221/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| ||||||||||| || Sbjct 85292 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 85233 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC-GTCTATACGTAAAAAGGC 125374 || || | || ||||| |||| || || || | || ||| | | |||| ||| Sbjct 85232 CAGCGCGAGTAC---CTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAA-GGC 85177 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| | ||||| | || | | ||||| | ||||| || Sbjct 85176 CGAGTGGGCCCTGCGCTGGATCAACGACGAGGACTCCACTTTTGCCGAGCGCCTGGTTGC 85117 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || |||||||||||||||||||| || || ||| || ||||||| |||||||| Sbjct 85116 CTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 85057 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || ||||||||||| || || | |||||| | || ||||||||||| Sbjct 85056 GAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGG 84997 Query 125555 CCTACACTGTGACTTTGC 125572 || ||| |||||||| Sbjct 84996 TCTGCACACCGACTTTGC 84979 Score = 118 bits (130), Expect = 2e-21 Identities = 184/252 (73%), Gaps = 11/252 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | ||| ||| |||| || Sbjct 85608 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACTGCCGAGGAGATCGACCTC 85549 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || |||| ||||| | |||| || | |||||| | || || Sbjct 85548 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 85489 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || |||||||||| || ||||| ||||||||||| || || || || || Sbjct 85488 CACGTCCTCGCATTCTTTGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGA-GCG 85430 Query 125198 ATTC-TCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253 ||| ||| |||| | ||| | |||||| ||| ||||| ||||| |||||||||| Sbjct 85429 GTTCAGCTC-AGAG--GTCCAGGCAGCAGAGG-CTCGATGCTTCTACGGCTTCCAAATCA 85374 Query 125254 TGAT-TGAGAAC 125264 |||| |||| || Sbjct 85373 TGATGTGAGTAC 85362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741050196130720