Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq866 116 3e-21 seq611 96.9 3e-15 >seq866 Length=73677 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | |||||| |||||||| | ||| |||||| | ||| | ||||| Sbjct 71461 ACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCG 71402 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| |||||| | ||||| | | || ||||| |||||||| || || ||||| | | Sbjct 71401 AGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGA 71342 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | |||||| | ||| ||||| | || || |||| |||||||| || Sbjct 71341 ATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTG 71282 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||||||||| Sbjct 71281 CCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||| || |||||||| | ||| |||||| | ||| | ||||||| Sbjct 71689 ACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 71630 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || ||| | ||||| |||| ||| || || |||||||| || || ||||| | Sbjct 71629 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 71570 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||||||| | | ||||| | || || || | ||||| || || Sbjct 71569 ATCTTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTG 71510 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 71509 CCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||||| ||| || ||||| || | ||| |||||| | ||| | ||||||| Sbjct 66377 ACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 66436 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | ||| || ||| | ||||| | | || || || ||||| || || || ||||| | Sbjct 66437 AACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 66496 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| ||| | ||| ||||| | || || || | |||||||| || Sbjct 66497 ATCTTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTG 66556 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || || || ||||||||||| Sbjct 66557 CCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||||||||| || || ||||| || | ||| |||||| | ||| | ||||| Sbjct 66605 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 66664 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || |||||| | ||||| | | ||||| || || || ||||| || ||||| | | Sbjct 66665 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGA 66724 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || | ||| ||| | ||| ||||| | || || || | ||||| || || Sbjct 66725 ATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTCTTG 66784 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 66785 CCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 >seq611 Length=85925 Score = 96.9 bits (106), Expect = 3e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || ||| | ||||| | || || || || || ||||||||||| ||| Sbjct 39053 TCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTG 38994 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | |||||| | |||||||||| ||| | ||| | || || || | ||||| Sbjct 38993 TCCTGAATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATA 38934 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || || || || || || || |||||||||||||| Sbjct 38933 GTCTTACCCGTCAGGGTCTTGACGAAGATCTGCATGCT 38896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285753261920