Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq866 132 4e-26 seq611 98.7 9e-16 seq279 95.1 1e-14 seq445 82.4 7e-11 >seq866 Length=73677 Score = 132 bits (146), Expect = 4e-26 Identities = 161/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | ||||| || |||||||| |||| |||||||| || Sbjct 66357 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCA 66298 Query 25059 GACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| ||||| || || ||| |||| | ||| ||||| || || ||||| || ||| Sbjct 66297 GACACCATCGA--CAATGTCAAGACAAAGATTCAG-GACAAGGAGGGCATTCCTCCGGAC 66241 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| | || || |||||||| || || || || | ||||| || || ||| Sbjct 66240 CAACAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTAC 66181 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || ||||| || || || || || Sbjct 66180 AACATTCAAAAGGAGTCCACACTGCACTTGGTCCT 66146 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || |||||||| ||||||| || || || Sbjct 66585 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCA 66526 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| ||||| || || || || || |||||| Sbjct 66525 GACACGATCGACAACGTAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 66466 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || || || |||| ||||| | ||||||||| Sbjct 66465 CAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 66406 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || Sbjct 66405 ATCCAGAAGGAGTCAACTCTGCACTTGGTCCT 66374 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/202 (71%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || |||||| |||| || || ||||||| |||| || ||||| || ||||||||||| Sbjct 71037 GTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA- 71095 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| || || || || ||||| || ||||||||||| | | Sbjct 71096 -CAATGTCAAGACCAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTCA 71154 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | || ||||| || || | || || | ||||| | ||| ||||| |||||||| | Sbjct 71155 TCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATTCAAAAGG 71214 Query 25189 AATCCACGCTACATTTAGTGCT 25210 | || || || || || || || Sbjct 71215 AGTCTACTCTTCACTTGGTCCT 71236 >seq611 Length=85925 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| ||||| | ||||| |||| |||||||| || Sbjct 38899 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 38958 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| | ||||| | | ||| | |||| ||| ||||| ||||| ||||| || ||||| Sbjct 38959 GACTCCATCGACGCCGTCAAGACCAAAATTCAG-GACAAGGAAGGTATTCCCCCGGACCA 39017 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || |||||||| || | || || | || ||| | || ||||| Sbjct 39018 ACAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 39077 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 39078 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCT 39110 >seq279 Length=20706 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || | ||||| |||| || |||||||| ||| | ||||| Sbjct 11738 GTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGAC 11679 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | | ||| || ||| ||||| ||||| || || || ||||||||||| | || Sbjct 11678 GCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCATC 11619 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | || || | ||||||| | ||| ||||| || || || || Sbjct 11618 TTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAG 11559 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || || || || || Sbjct 11558 TCCACTCTCCACTTGGTCCT 11539 >seq445 Length=91251 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||||| || Sbjct 7484 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 7543 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || || || |||||| Sbjct 7544 GACACCATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 7603 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || |||||||| || | ||||| | || || | ||| ||||| Sbjct 7604 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 7663 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || ||||||||||| || || || Sbjct 7664 ATCCAAAAAGAATCGACCCTCCA 7686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322866688180