Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq866 145 6e-30 seq445 114 1e-20 >seq866 Length=73677 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||||||||| |||||| | | Sbjct 71253 ATGCAGATCTTCGTCAAGACGCTCACTGGCAAGACCATCACTCTTGAGGTGGAATCATCA 71312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| ||||||||||| ||||| || |||||| Sbjct 71313 GACACCATCGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCAA 71372 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||| || ||| | ||||| ||||||| |||||||||||||| Sbjct 71373 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCTCCGATTACAAC 71432 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || || | || || || | || |||| || ||| Sbjct 71433 ATTCAAAAGGAGTCTACTCTTCACTTGGTCCTCCGCCTGCGTGGTGGT 71480 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | ||||| || || |||| || || ||||| | | Sbjct 66357 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCA 66298 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| ||| ||||| ||||||||||| ||||| || || ||| Sbjct 66297 GACACCATCGACAATGTCAAGACAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 66238 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||| ||||| ||||| ||||||| | || || |||||| Sbjct 66237 CAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACAAC 66178 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| || ||||| Sbjct 66177 ATTCAAAAGGAGTCCAC 66161 Score = 134 bits (148), Expect = 1e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || |||||| | || Sbjct 71481 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACACTCGAGGTGGAATCATCC 71540 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || || || ||||||||||| ||||| || || ||| Sbjct 71541 GACACCATTGATAACGTCAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 71600 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| | || || |||||||| ||||| |||||| ||||||| | |||||||||||| Sbjct 71601 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 71660 Query 22399 ATTCAAAAAGAATCCAC 22415 |||||||| || ||||| Sbjct 71661 ATTCAAAAGGAGTCCAC 71677 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || ||||| ||| | | Sbjct 66585 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCA 66526 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || || || ||| Sbjct 66525 GACACGATCGACAACGTAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAA 66466 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||||| |||||| ||||||| | |||||||||||| Sbjct 66465 CAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 66406 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || || | || || || | || |||| || ||| Sbjct 66405 ATCCAGAAGGAGTCAACTCTGCACTTGGTCCTCCGCCTGCGTGGTGGT 66358 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| |||||||| || || | ||||| || || |||| || ||||| || | | Sbjct 67041 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAGACAATCACGCTGGAAGTTGAGTCATCA 66982 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || |||||||||||||| || || || || Sbjct 66981 GACACGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 66922 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| ||| | ||||| |||||| | || ||||||||| Sbjct 66921 CAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAAC 66862 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||| || |||||| Sbjct 66861 ATCCAAAAGGAGTCCACC 66844 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | || || || || |||| || || || || || | || || | ||| Sbjct 71037 GTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGAC 71096 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || ||||| |||||||| ||||| || || ||||| || || || Sbjct 71097 AATGTCAAGACCAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTCATC 71156 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || ||||| || ||| | ||||| ||||||| ||||||| |||||||||||||| || Sbjct 71157 TTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATTCAAAAGGAG 71216 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || | || || || | || |||| || ||| Sbjct 71217 TCTACTCTTCACTTGGTCCTCCGCCTGCGTGGTGGT 71252 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 ||||| ||| | || || || || |||| ||||| || || || |||| ||| | ||| Sbjct 67257 GTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCCGACACCATTGAC 67198 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || || ||||||||||| || || || || || || |||||||| Sbjct 67197 AATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTATC 67138 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || ||||| || ||| | ||||| ||| || | || || |||||||| || || || Sbjct 67137 TTCGCCGGAAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAGGAG 67078 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| | || | ||| | || | ||||| ||| Sbjct 67077 TCCACACTTCACCTTGTTCTCCGTCTCCGCGGTGGT 67042 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || ||||| | | Sbjct 66813 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAGGTGGAGTCATCA 66754 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || ||||| |||||||||||||| || || || || Sbjct 66753 GACACCATCGACAACGTAAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACCAG 66694 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || || | ||||| ||||||| | |||||||||||| Sbjct 66693 CAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAAC 66634 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || ||||| | || || || | || |||| || ||| Sbjct 66633 ATCCAGAAGGAGTCCACATTGCACTTGGTCCTCCGCCTGCGTGGTGGT 66586 >seq445 Length=91251 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || || Sbjct 7484 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 7543 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || |||||||||||||| || || || || ||| Sbjct 7544 GACACCATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAA 7603 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||||| || || |||||||| ||| | || || ||| || | ||||| |||||| Sbjct 7604 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 7663 Query 22399 ATTCAAAAAGAATCCACC 22416 || ||||||||||| ||| Sbjct 7664 ATCCAAAAAGAATCGACC 7681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723027797180