Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq356 104 5e-17 seq444 100 6e-16 seq130 91.5 3e-13 >seq356 Length=94465 Score = 104 bits (114), Expect = 5e-17 Identities = 284/430 (66%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||| | ||| ||||| |||||||||||||||||| |||||||| Sbjct 84712 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 84771 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| ||||| | || || ||||| | | ||||| || ||||| || | ||| Sbjct 84772 TTGTAGTGCTTCACGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 84831 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| ||| | ||||||||| |||| ||| |||| || || | ||| Sbjct 84832 TGGCTCATAAGTCGTGCGTTCATGCCGATCAATGAACAGGGAAGAGCATCGGTCAGGAAA 84891 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAAT-TGC----CTTCACCTGTGCCAGAGACA 251800 ||| || ||| || | ||| | | || || | || | | | | | | Sbjct 84892 GCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG--TGCGGCC 84949 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||| || | | || || ||| | |||| | ||||||||||||||| | Sbjct 84950 GCTTCTTGAGGTGGCTGAAGAGCA--AGCAAG-CAAAGTCGGTGTGCAGACCCTCGTCTC 85006 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||||| ||||||||| | || || ||||| | ||||| ||| ||||||||| Sbjct 85007 GGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 85066 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | | || || || ||||| | | ||||| || | | ||||| |||| Sbjct 85067 AGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAAGGCAACCAGGC 85126 Query 251981 GCTCAGCAAA 251990 |||| ||||| Sbjct 85127 GCTCGGCAAA 85136 >seq444 Length=195309 Score = 100 bits (110), Expect = 6e-16 Identities = 664/1051 (63%), Gaps = 79/1051 (8%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||| ||||| | ||||| ||||| || |||| |||||||| || ||| Sbjct 43461 GGTGAGGACTTGTGCAACTGTCAGTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTCAAC 43520 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||||| |||| || |||||| || | || || | Sbjct 43521 ACCGCCACTCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGTGGCCGTAACGGTTCC 43580 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||||||| ||||||||| | || || || ||| | Sbjct 43581 GGCAAGTCTACCCTCATGCGCGCCATTCAGAACGGTCAGGTCGAGGGTTTCCCTTCGCCC 43640 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584 ||||| | ||| ||| || |||||||| |||| | | || ||| || | Sbjct 43641 GACGAGGTTCGCACATGGTACGTCGAGCACGATCTCGA-TGGT-TCCGAGGGAGAGATGT 43698 Query 279585 G--TGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642 | || |||| | | | | | ||| | | | | | ||||| ||||| Sbjct 43699 CCATTTTGGACTACATCATGACCGACGACCGCCTCAGCGT------CTCTCGGGAGGAGG 43752 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAA---GAATGCGTAATCTGCCAGTAG 279699 | || | || | || | || || || ||| || | | |||| ||| | | Sbjct 43753 CCGTCAGCACTCTTGCGGAGATGGGCTTCGACGAAGTTCGACAGGG--ATCTCCCA-TCG 43809 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 || || || ||||| |||||||||||||| || ||| | || ||| | || | | Sbjct 43810 CCTCGCTCTCTGGTGGCTGGAAGATGAAGCTCGCTCTCGCCCGTGCCGTGCTCTTCAAGG 43869 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 |||| | || || || |||||||| ||||||||| ||||| | |||| | || ||| Sbjct 43870 CCGACATTCTCCTCCTCGATGAGCCCACCAACCACTTGGACGTCGTCAACATCGCTTGGA 43929 Query 279820 TAGTGTCCTACCTAACCA--GTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTC 279877 | |||||| |||| |||| || ||| | || ||||||| || |||||||| Sbjct 43930 TCACCAACTACCTCACCAACGTCTCAA--ATGCCACCGCCATCATTGTGTCGCACGACTC 43987 Query 279878 TGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGC-----AAAATCTGAAG 279932 | ||||| || ||| ||| | | ||| ||||| | | | || ||| ||| Sbjct 43988 TCAATTCCTCGACAACGTCTGCACGGACATTCTTCACCTTAACCGCTTCAAGATC--AAG 44045 Query 279933 C--TCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCG 279990 | | ||| ||| ||| ||||||| ||||| || ||||||||| | Sbjct 44046 CGTTATCC--------CGGTAACTTGTCTGCCTTCGTCGCTCGTGTCCCTGAGGCCAAGG 44097 Query 279991 CCTACTATGACCTGAA---------GGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAG 280041 ||||| || || || |||| || | |||| ||||| || || Sbjct 44098 CCTACGCCGAGCTCAACACCGGTGAGGACTACAGCTTCAAGC-----TTCCC-GACCCGC 44151 Query 280042 GGTTTCTGGAGGGCATCA-----CATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGT 280096 |||| || || ||| | | | | | |||| || | ||| | |||| ||| Sbjct 44152 CACTTCTCGACGGTGTCAAGACGCGTGAGAAG-TCGC----TCGTTAAGATGCGTGACGT 44206 Query 280097 CTCCTTTGCTTATCCCAATGGCCCCAACATCTTCAGC---AGTGTCAACTC---GCAGGT 280150 || || || ||| | |||| || | ||| | || || | ||| |||| | Sbjct 44207 CTGGTTCCAATACCCCGGTACCCCCGAC--CCTCAACTCAAGGGT-ATCTCCATGCAGCT 44263 Query 280151 TTCTATGAACTCACGGATTGGTGTCATT---GGACCCAATGGTGCGGGTAAGTCTACCCT 280207 ||| || || || || || |||| || ||||| ||| | || ||||| || || Sbjct 44264 GTCTTTGTCGTCGCG---TGTTGCCATTCTCGGTCCCAACGGTTCCGGCAAGTCGACGCT 44320 Query 280208 AATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCA 280266 |||| || || || || || |||||| ||| ||| | | |||||||| |||| Sbjct 44321 CGTCAAGCTCATGGTCGGTGACACAGAGGCCAA-GAGCGGTGAGGTGTGGAAGCACCCCA 44379 Query 280267 ACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACA 280326 || || || | |||||||| || |||||||||||||||||||| | ||| |||||| Sbjct 44380 ACTTGGTTATCGGATACGTCGCCCAACACGCTTTCCACCACATCGACCAGCACTTGGACA 44439 Query 280327 TGACTCCTAACCAATACATTCAGTGGCGCTA 280357 ||| ||| | | ||||| |||||| || Sbjct 44440 AGACCCCTCTCGACTACATGTTGTGGCGATA 44470 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || | ||||| ||| | ||| ||| || ||||| ||||| ||||||||| Sbjct 44875 GGTCTCGAGCGTGAGTTCACATCGCACAACACCATGCGTGGTCTCTCTGGTGGCCAGAAG 44934 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 ||||| |||| |||| || || |||| | || ||| | |||| ||||||||| Sbjct 44935 GTCAAGATTGTGCTCGGTGCCGCAACATGGCGTAAGCCCCACATTGTCGTCCTCGACGAG 44994 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTG--GGCGCTC 280836 || ||||||| ||||||| ||| |||| ||||||| Sbjct 44995 CCCACCAACTTCTTGGACCGTGAGTCCCTGGCGGCGCTC 45033 >seq130 Length=41321 Score = 91.5 bits (100), Expect = 3e-13 Identities = 169/242 (70%), Gaps = 12/242 (5%) Strand=Plus/Minus Query 293131 AAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTC 293190 |||||||| || || || || | ||| || | |||| |||||||||||| |||| Sbjct 38411 AAGGCACCTCGGTCGGCGGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGTC 38352 Query 293191 TTGTACACTGCCTTGACATCAGG--ATGAATGCCAATAACCTTCTGGATAGACCCTCCGT 293248 ||||||| ||||||| || || ||||||| || |||||||| || || |||| Sbjct 38351 TTGTACAGTGCCTTG--ATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGT 38294 Query 293249 TGGCAATAATCTGGTTCTTCATTGTCTCGGACCA-AGTCC---CACGAGCAATGAGCTCG 293304 ||| || || |||||||||| |||| ||| || || | ||| || ||||| Sbjct 38293 GGGCTATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTTGCTCGA-CA---AGCTCA 38238 Query 293305 CGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATG 293364 || | || ||| |||||| || ||||||| || ||||| || ||| |||||| | Sbjct 38237 CGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGG 38178 Query 293365 TT 293366 || Sbjct 38177 TT 38176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823999577452