Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq130 464 1e-125 seq356 251 1e-61 >seq130 Length=41321 Score = 464 bits (514), Expect = 1e-125 Identities = 1149/1723 (67%), Gaps = 59/1723 (3%) Strand=Plus/Minus Query 243898 GACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGC 243957 || ||||| | || || ||||||||| ||||| | ||||||| || ||||| || | Sbjct 38415 GATGAAGGCACCTCGGTCGGCGGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACAC 38356 Query 243958 CGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTT 244017 |||||||| | | ||||| | | ||||| | || | |||||| | |||||| Sbjct 38355 TGTCTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCC 38296 Query 244018 GTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTC 244077 |||| | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 38295 GTGGGCTATGATGCGGTTCTTCATCTGCTCGTTCCACAGACCTT---GCTCGACAAGCTC 38239 Query 244078 GACCAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAG 244134 ||| ||| ||| || || || ||||| || | ||||| || || ||| || Sbjct 38238 ACGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAG 38179 Query 244135 GTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGT 244194 |||||| || ||||| | || ||| || ||| || ||||| || || || Sbjct 38178 GTTGCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGAATCTGACTTGTCGAAGCGGT 38119 Query 244195 CGGCATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTG 244252 ||||| || | | ||| || ||| | | ||||| | || ||| | | || Sbjct 38118 GGGCATAGGGGCGAGCAGGAGGGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTG 38061 Query 244253 AGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAAC 244312 | |||| ||||||||| | | ||| || | | | || ||||| | ||| | Sbjct 38060 ATCTCGGCCCAGTCCCAGA-GTCCG-------CTGGGGGT-GACTCCCCAGAGGTCGTAT 38010 Query 244313 TGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGG 244372 |||||| ||||||||| |||||||||||||| ||| ||||| ||| || | Sbjct 38009 TGCAGCTCGCCCTTGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTG 37950 Query 244373 GCCAGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTT 244431 || |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| Sbjct 37949 GCGAGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTT 37891 Query 244432 CATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAG 244491 | | ||||| | || | ||||| | ||||| |||||||| ||||||| || Sbjct 37890 GAGCTTCTTGGCCTCGGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAG 37831 Query 244492 TCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCAC 244551 || | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || Sbjct 37830 ACCGTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTTGCCTCGGGAAC 37771 Query 244552 GGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGAC 244608 ||||| ||||| ||||||| | |||||||||||||| || | || || | Sbjct 37770 AGGGTAGTAGTTGACGTCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTC 37711 Query 244609 GTCGGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACAA 244667 || | ||| || |||||||| || | | | || | |||| | ||| || Sbjct 37710 GTGG---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGT 37655 Query 244668 ACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACT 244727 | || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 37654 AAGAAGGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACT 37595 Query 244728 GGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACT 244787 | ||||| ||||| ||||| |||||||||||| || |||| || || || |||| Sbjct 37594 CCATGATCTCCGTGCACAGGTTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACT 37535 Query 244788 TGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGA 244847 || |||| ||||||||||| |||||||| || || ||||| |||||| ||| Sbjct 37534 TGCGGTTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGA 37475 Query 244848 GGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGT 244907 | ||| || ||| || | ||||||||| || | |||||| ||||| ||||| Sbjct 37474 GAACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGT 37415 Query 244908 AGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACG 244967 | ||| || |||||||| ||| ||| |||| || | || ||||||||| | Sbjct 37414 ACTTCTCGTAGAGAGCCTCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGG 37355 Query 244968 CCGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGA 245027 | |||||||| || ||| || ||| | | ||| | || |||||| | ||| |||| Sbjct 37354 CGGGGCACATCAGCGACCATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGA 37295 Query 245028 TCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCT 245085 |||| ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| Sbjct 37294 TCCAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCT 37237 Query 245086 CAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCC 245145 || || | || || |||||||| |||||||||||| ||||||| |||| ||| || Sbjct 37236 GAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC 37177 Query 245146 GGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCA 245201 || ||||||||||| |||||||| | | | || ||| |||||||| ||| | Sbjct 37176 TGGACGCTTGTTGCCACCCTGGTCGA----CGTAGCGGGCGGTGTTGTTGAAGACGCGAA 37121 Query 245202 GGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC 245261 | ||||||| || ||||||||| ||||| || || ||||| | ||| | || | Sbjct 37120 GCATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCAC 37061 Query 245262 TGAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCT 245321 || | | |||| | ||| | || || || |||| ||| | ||||||| ||| Sbjct 37060 GGATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT 37001 Query 245322 TGATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGG 245381 ||| ||||| ||||| || || ||| ||||||| ||| ||| ||||| || | Sbjct 37000 TGAGAGTGTCGTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATG 36941 Query 245382 ACAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGC 245441 ||| || || ||||| | | | |||||| || |||||| ||| ||||| ||||| | Sbjct 36940 ACATTTGAGGGTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA-C 36882 Query 245442 GGCT-CGAGAGGAACCCGTACGTCTGGAGCAGAGCGTCGATGTTGTCGCCGTGGATCTGC 245500 || ||| | || ||| || | || |||||||| ||||||| ||| Sbjct 36881 TTCTCCGACATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGC 36824 Query 245501 AGGGCGCACCT--CATGAGGGTGTGCTGGGGCGTCTCGATGGGTCCCTCGGGTCCCTTG- 245557 | ||| || |||||| |||| ||||| |||| | | || | || ||| Sbjct 36823 CGACAGCAACTCGCATGAGCATGTGTTGGGGGCGCTCG--GCGACCTT----GCCGTTGA 36770 Query 245558 -----AGCATGTAGGAGCGCTCGAGCGTCTTGAACCCAAAGTA 245595 |||| |||||||||||||| |||||||| || ||||| Sbjct 36769 TGCGCAGCAGATAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 36727 >seq356 Length=94465 Score = 251 bits (278), Expect = 1e-61 Identities = 418/592 (71%), Gaps = 19/592 (3%) Strand=Plus/Minus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 85292 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 85233 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | ||||||||||| || ||| | ||||| | ||||| || Sbjct 85232 CAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 85173 Query 42657 TGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||| || ||||||| | ||| ||| | || || | |||| | ||||| || Sbjct 85172 TGGGCCCTGCGCTGGATCAACGACGAG----GACTCCACTTTTGCCGAGCGCCTGGTTGC 85117 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| Sbjct 85116 CTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 85057 Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| ||||||||||| ||||| ||||||||| | ||||||| Sbjct 85056 GAAGCGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 84998 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCG 42890 | ||||| | |||||||| ||| | || ||| |||||||||| | | ||| | | Sbjct 84997 GTCTGCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACC 84941 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 | | | || | | |||||| | ||| | || || ||| ||| ||||| || Sbjct 84940 CCGATGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACC 84882 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCA 43009 | | || ||| || || ||||||||||| ||||| || ||| || |||||||| | Sbjct 84881 GATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGA 84823 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 | ||||| |||| || || || | ||| | | | ||||||| | | Sbjct 84822 ATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGTGAAG-CACTACAACGCCACAA 84764 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||||| ||||||||||||||| || | |||||||| ||||| || Sbjct 84763 ATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 84712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327726278720