Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq444 102 2e-16 seq81 84.2 5e-11 >seq444 Length=195309 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 334185 ||||| || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 43687 TCGGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 43630 Query 334186 ACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTG 334245 | || || | |||||||||| ||| |||||||| || || || || || | ||||| Sbjct 43629 AACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTAC 43570 Query 334246 GCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAA 334305 | ||||| |||||||| |||| |||||||| || || | |||| ||||||| Sbjct 43569 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 43510 Query 334306 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 43509 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 43461 >seq81 Length=49796 Score = 84.2 bits (92), Expect = 5e-11 Identities = 149/211 (71%), Gaps = 10/211 (5%) Strand=Plus/Minus Query 298244 TTGTACACTTTACCGGTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTT 298302 ||||| ||||| | |||||| |||||||| | ||||| | || |||| || | || Sbjct 16437 TTGTAGACTTTTTGGTGTTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCCGCATT 16379 Query 298303 CTTCGTGATGCTTGCCACG---GATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGG 298359 |||| ||||| || || || || |||||||| || | || ||||| || || || Sbjct 16378 CTTCATGATG---GCGTCGTGCGAAGCTTCGCGGACGTTGAGCAGCTTTCCGCGTAGCGG 16322 Query 298360 GAACACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-G 298418 ||||||||| | | || || ||||| ||||| ||||| ||| || || | | | | Sbjct 16321 GAACACTCCCCAGTTGTCACGTCCGACGACGGAAAGCCCACCGACGGC-AGAGGCTTTGG 16263 Query 298419 CGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449 | || || |||||||| || || || ||||| Sbjct 16262 CAGAGTCTCCCTCCGTAAGGATTAGCGTGCA 16232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102866265008200