Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq866 138 1e-27 seq611 114 1e-20 >seq866 Length=73677 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| |||| |||| |||||||||||| ||||| || | ||| || || |||| || Sbjct 66149 ACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCC 66208 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | |||||| || ||||| || | |||||| ||||| | || | || |||||||||| || Sbjct 66209 AACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-TG 66267 Query 42120 ATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | ||||| |||| | | | ||||| || ||||| |||| |||||||| || Sbjct 66268 AATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATGGTCTT 66327 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| |||||||||||||| Sbjct 66328 GCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| ||||||||| |||||| || || |||||||| | || || || |||| || Sbjct 66605 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 66664 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 || ||||| || ||||| ||||| ||||||||||| | || | | |||||||||| || Sbjct 66665 AGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TG 66723 Query 42120 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || || | ||| | | | ||||| || ||||| |||| ||||| || || Sbjct 66724 AATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTCTT 66783 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || ||||| || ||||| ||||| Sbjct 66784 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| |||||||| | || || || |||| || |||||||| || ||||| Sbjct 71444 CTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 71385 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 42135 ||||| ||||| || || | || | || |||||||||| ||| | || || |||| Sbjct 71384 GATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGTCTTGACAT 71326 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| |||||||| || | |||||||| ||||| || |||||||| | Sbjct 71325 TGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGA 71266 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 71265 CGAAGATCTGCAT 71253 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || |||||||||| ||||| || |||| || |||||||| || ||||| Sbjct 66850 CTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAA 66909 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | | |||||||||| || | || || | ||| Sbjct 66910 GATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC-TGGATCTTCGTCTTCACGT 66968 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || || || || | |||||| || ||||| || || ||||| | Sbjct 66969 TGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGTGAGGGTCTTGA 67028 Query 42196 CAAAGATTTGCAT 42208 |||| || ||||| Sbjct 67029 CAAAAATCTGCAT 67041 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||||||||| |||||||| | || || || | || || Sbjct 71689 ACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 71630 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 | |||||| || ||||| || | ||| || ||||| | || | || |||||||||| | Sbjct 71629 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 71570 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 42179 || || |||| | | | |||||| |||||||| |||| ||||| || ||| Sbjct 71569 ATCTTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTG 71510 Query 42180 CCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || ||||| || ||||| ||||| Sbjct 71509 CCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 42011 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 42070 |||| |||||| || || ||||| || | || || || |||| || |||||||| || Sbjct 67072 TGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTTCC 67131 Query 42071 AGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 42130 ||||| || || ||||||||||| | || | || |||||||||| ||| || || Sbjct 67132 GGCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 67191 Query 42131 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 || | | | |||||| || || || || | |||||||| ||||| || || || Sbjct 67192 GACATTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGT 67251 Query 42191 CTTTAC 42196 ||| || Sbjct 67252 CTTAAC 67257 Score = 86.0 bits (94), Expect = 7e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||||||||| ||||| || | || || || |||| || |||||||| || ||||| Sbjct 71216 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAA 71157 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||| ||||| | || | || |||||| || ||| || |||| | Sbjct 71156 GATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCTTGGATCTTGGTCTTGACATT 71097 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 71096 GTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 71037 >seq611 Length=85925 Score = 114 bits (126), Expect = 1e-20 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 39090 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 39031 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGA--G 42133 ||||||||||| ||||| | || | | ||||||||| ||| |||| || |||| | Sbjct 39030 GATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC-TGAATTTTGGTCTTGACGG 38972 Query 42134 CGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 ||||| | | |||| || ||||| |||| ||||| || || ||||| || ||||| Sbjct 38971 CGTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTT 38914 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 38913 GACGAAGATCTGCAT 38899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543206199964480