Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq866 109 5e-19 seq611 96.9 3e-15 seq445 96.9 3e-15 seq130 82.4 8e-11 >seq866 Length=73677 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || ||||||||||||||||| | || |||||| |||| || |||||| Sbjct 71455 TGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCCTCGAGCTGC 71396 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | ||||| ||||| || || |||||||| || || || || || || || Sbjct 71395 TTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGAATCTTC 71336 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | || || | ||||| || | ||| | ||||||||| || Sbjct 71335 GTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTCTTGCCAGTG 71276 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| || ||||| Sbjct 71275 AGCGTCTTGACGAAGATCTGCAT 71253 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || |||||||||||||| || | || |||||| |||| ||||||||| Sbjct 71227 TGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGCTGC 71168 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | ||||| ||||| ||||| || ||||| || || || ||||| || || Sbjct 71167 TTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCTTGGATCTTG 71108 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | || || || || || || | || | ||||||||| ||| Sbjct 71107 GTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTC 71048 Query 64421 AAAGTTTTTACG 64432 | ||| || ||| Sbjct 71047 AGAGTCTTGACG 71036 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || |||||||||||||| || | | |||||| |||| || | |||||||||| Sbjct 66161 GTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCCTCCAACTGCTTGCCG 66220 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||| ||||| |||||||| || || || || || || ||| ||| Sbjct 66221 GCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTTGTCTTG 66280 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | ||||| || | || | |||||||||||| | || Sbjct 66281 ACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTC 66340 Query 64427 TTTACGAAAATTTGCAT 64443 || || || |||||||| Sbjct 66341 TTGACAAAGATTTGCAT 66357 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || || || | || || || ||||| ||||||||||| | Sbjct 66814 ACCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGA 66873 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| |||| ||||||||||||||||| | || || ||||||||||| || || Sbjct 66874 AAGAGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGG 66933 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || || | || || | || || Sbjct 66934 GATACCCTCCTTGTCCTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGATGACTCAAC 66993 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||||||||||| | || || || ||||| ||||| Sbjct 66994 TTCCAGCGTGATTGTCTTGCCGGTGAGGGTCTTGACAAAAATCTGCAT 67041 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | | |||||| | || || | |||||||||| Sbjct 66389 GTTGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCG 66448 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||| ||||| ||||| || || || || || || || || |||| Sbjct 66449 GCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTT 66508 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || ||||| | || | ||||||||| || | || Sbjct 66509 ACGTTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCAGTGAGGGTC 66568 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 66569 TTGACGAAGATCTGCAT 66585 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | | |||||| |||| || || ||||| ||| Sbjct 66617 GTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTTCCG 66676 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||||||||| || || || || || || || || || || |||| Sbjct 66677 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGAATCTTGGTCTTT 66736 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | ||||| || | || | ||||||||||| | || Sbjct 66737 ACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTCTTGCCGGTGAGGGTC 66796 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 66797 TTGACGAAGATCTGCAT 66813 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || ||||||||||||||||| | | |||||| | || || | |||| Sbjct 71683 TGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 71624 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| | || | || || ||||| |||||||| || || || || || || || Sbjct 71623 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTC 71564 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | ||||| || | || | ||||||||||| Sbjct 71563 GTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTGCCGGTG 71504 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | || || ||||| || ||||| Sbjct 71503 AGGGTCTTGACGAAGATCTGCAT 71481 >seq611 Length=85925 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | |||||| || || | ||||| || || || |||||||| || | Sbjct 39126 ACCACCACGCAGGCGAAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 39067 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || |||| || |||||||||||||| | ||||| ||||| ||||| || || Sbjct 39066 AAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGG 39007 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || || || ||||| ||| || | || | | || | ||||| Sbjct 39006 AATACCTTCCTTGTCCTGAATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCAC 38947 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || |||| || || ||||| || ||||| Sbjct 38946 CTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 38899 >seq445 Length=91251 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | || || || || | |||||||||||||| |||||||| || | Sbjct 7711 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGA 7652 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || ||||||| |||||||||||||| | ||||| || || ||||| || || Sbjct 7651 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGG 7592 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || || ||| || || | || || || || || Sbjct 7591 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTAC 7532 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 7531 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACGAAGATCTGCAT 7484 >seq130 Length=41321 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 155354 GTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCAT 155413 ||||||||| |||||||| |||| ||| || ||||| || |||| || || ||||| Sbjct 36867 GTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCAT 36808 Query 155414 CAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGC 155456 ||||||||||| |||||| || || ||||||||||||| Sbjct 36807 GAGCATGTGTTGGGGGCGCTCGGCGACCTTGCCGTTGATGCGC 36765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638729315680