Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq130 260 1e-64 >seq130 Length=41321 Score = 260 bits (288), Expect = 1e-64 Identities = 1002/1551 (65%), Gaps = 41/1551 (3%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| || |||| ||||| |||||||| || || || || || ||||| ||||| | Sbjct 36891 CCATG-CCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCT 36949 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| | || | |||| |||||| ||| || || | ||||| |||||| ||| | Sbjct 36950 TCCTGGTCACCATGAAGGACGACTCGATCGATGGCATCTACGACACTCTCAAGACCTGCG 37009 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | | ||| || || || || ||||| ||| ||||| | | |||| | | Sbjct 37010 CCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCG 37069 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || ||||| ||| || || || ||| ||||| |||| |||||||| || |||| Sbjct 37070 GCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCT 37129 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | || |||||||| ||||||||||| | | | ||| | ||||| Sbjct 37130 TCAACAACACCGCCCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCA 37189 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| | |||||||||||| | ||||| | ||| ||||||| | |||||||||| Sbjct 37190 TCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACG 37249 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | || ||||||||||| || ||| | || ||| | || | Sbjct 37250 GCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCA 37309 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || ||||| ||||| | ||| || | || ||| || || ||||| | Sbjct 37310 TGAAGCGAGTCGAACAAAACGGAGAATGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTC 37369 Query 94367 TGTCCGACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG 94424 | | || || | || || || || || || | || | ||||| |||| Sbjct 37370 TCGCTGATGTCTACGG--CGACGAATTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGG 37427 Query 94425 CAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTAC 94480 || | | | || | | ||| ||||| ||| | | | || | || | | Sbjct 37428 TCGTGCTCGCCGAACCGTCA---AGGCTCAAAAGCTTTGGTACGCCGTTC-TCGAGGCCC 37483 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || |||||| || | || | ||| | | ||||||| ||| |||| |||||| |||| Sbjct 37484 AGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCGAACC 37543 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 | || ||||||| |||||| |||| || |||||||| ||||| | ||||| | Sbjct 37544 AAAAGAACCTCGGTACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGAGTACAGCG 37603 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 ||||||| ||| | ||||| || ||||| | | || ||| | ||| ||| | | Sbjct 37604 CTCCGGATGAGGTCGCTGTCTGCAACCTTGCCAGTATGGCTCTGCCTTCTTACGT-CCAC 37662 Query 94661 AT-GCCT---ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 || | || ||||| || | | ||| | || |||| | || || Sbjct 37663 ATCGACTCGCACACGAACACAAGGACATACGACTTCAAGAAGCT------CCACGAGGTT 37716 Query 94717 AGGATGGTC--TTG----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCG 94770 | | |||| ||| ||||| |||| | | |||||| |||| |||||| || || Sbjct 37717 ACCAAGGTCGTTTGTGGCAACCTCAACAAGATCATCGACGTCAACTACTACCCTGTTCCC 37776 Query 94771 GAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCG 94830 ||||| |||| || ||| || || || |||||||| ||||| ||| | ||| |||| Sbjct 37777 GAGGCAAAGAAGTCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCC 37836 Query 94831 GACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 ||||| | |||| ||| || ||| |||| ||| || | | || | Sbjct 37837 GACGCTTTCATGATCATGGGTTACGCCTTCGACAGCCCCGAGGCCAAGAAGCTCAACATC 37896 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||| | || || ||| || | | | ||| | | | |||| | Sbjct 37897 CAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTCGCCA---AG 37953 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTT 95009 || |||| | |||| | | || || |||| | | ||||| | || | Sbjct 37954 GAGCTCGGGACCTACGAGAC-ATACGAGGGCAGCCCAACCAGCAAGGGCGAGCTGCAATA 38012 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCTGAT 95067 |||||||||||| || | ||| || || | ||||||| || || | |||| | Sbjct 38013 CGACCTCTGGGGAGTCACCCCCAGCGGACTCTGGGACTGGGCCGAGATC-AAGCGC-AAC 38070 Query 95068 GTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACG 95127 || | ||||||| | |||| | || || | ||||| |||||||| || || || Sbjct 38071 ATTGCCGCACACGGTCTCCGAAACTCCCTCCTGCTCGCCCCTATGCCCACCGCTTCGACA 38130 Query 95128 GCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGG 95187 ||||| || ||| |||||||| || || || | ||| |||| | |||| | | Sbjct 38131 AGTCAGATTCTCGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGA 38190 Query 95188 CGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGTC 95246 || ||||||||||| || |||| ||| ||||| || || || || | || || Sbjct 38191 CGTGTGCTCGCCGGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGAGCTTGTCG-A 38249 Query 95247 TCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCA 95306 | ||| ||||| || || | ||||||| | || | | |||||| |||| Sbjct 38250 GCAAGGTCTGTGGAACGAGCAGATGAAGAACCGCATCATAGCCCACGGCGGCTCGATCCA 38309 Query 95307 GAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCC 95366 |||| | || || || || ||||||||| || |||||||| |||||||||||| | Sbjct 38310 GAACGTGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTC 38369 Query 95367 GCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCA 95417 |||| || || ||||| || |||| ||| || ||||||||||||| Sbjct 38370 GCAGAAGGTCATCATCGACATGGCCGCCGACCGAGGTGCCTTCATCTGCCA 38420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717189113120