Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq866 120 3e-22 seq356 118 1e-21 seq445 86.0 6e-12 >seq866 Length=73677 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || ||||| |||||||| ||||| || | Sbjct 66131 CCACCGCGGAGACGGAGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGAC 66190 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || | ||| || || ||| ||||||||||||| || || ||||| Sbjct 66191 AGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGA 66250 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| | | || ||||| | |||| |||||| | ||| || Sbjct 66251 ATGCCCTCCTTGTCC-TGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCAC 66309 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || ||||| || ||||| Sbjct 66310 CTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 66357 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| |||||||| ||||||||| Sbjct 71707 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAA 71648 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||||||||| || || || ||||| Sbjct 71647 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 71588 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| ||| ||||| | || | |||||| | || || Sbjct 71587 ATGCCCTCCTTGTCCTGGATCTTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACC 71528 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || || |||||||| Sbjct 71527 TCGAGTGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 71481 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| |||||||| ||||||||| Sbjct 71479 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAG 71420 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| ||||| ||| |||| | ||||| ||||| ||||| Sbjct 71419 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGA 71360 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||||| | |||| |||||| | || || Sbjct 71359 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACC 71300 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || || || |||||||| Sbjct 71299 TCAAGAGTGATGGTCTTGCCAGTGAGCGTCTTGACGAAGATCTGCAT 71253 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| || |||||||| | ||||| || || ||||| || || Sbjct 66845 GTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCAAGCTGCTTGCCG 66904 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| ||| ||| Sbjct 66905 GCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGTCTTC 66964 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||| | ||| ||||| | || | || |||||||| || || Sbjct 66965 ACGTTG-TCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTCTTGCCGGTGAGGGT 67023 Query 127096 TTTTACAAAAATCTGCAT 127113 || |||||||||||||| Sbjct 67024 CTTGACAAAAATCTGCAT 67041 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| |||||||| ||||| ||| Sbjct 71251 CCACCACGCAGGCGGAGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAG 71192 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| ||||| ||| |||| | ||||| || || || || Sbjct 71191 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGA 71132 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || ||| || ||||| | |||| ||||||| ||| || Sbjct 71131 ATGCCCTCCTTATCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACC 71072 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||| | || ||||| |||||||| || || Sbjct 71071 TCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGAC 71037 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||||||| Sbjct 66359 CCACCACGCAGGCGGAGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAA 66418 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || | ||| || || ||| |||| | ||||| || || ||||| Sbjct 66419 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGG 66478 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||| | |||| |||| ||||| | || || Sbjct 66479 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACGTTG-TCGATCGTGTCTGATGATTCAAC 66537 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| || | || ||||| || || || || || || |||||||| Sbjct 66538 TTCGAGTGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 66585 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||||||| Sbjct 66587 CCACCACGCAGGCGGAGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAA 66646 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || || || ||||| ||| |||| | |||||||| || || || Sbjct 66647 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 66706 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || || ||| | |||| |||| |||||| | ||| || Sbjct 66707 ATACCCTCCTTGTCCTGAATCTTGGTCTTTACGTTG-TCGATGGTGTCTGATGACTCCAC 66765 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || || |||||||| Sbjct 66766 CTCGAGTGTGATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 66813 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || || || || || || ||||| ||||| Sbjct 67073 GTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCCTCGAGCTGCTTTCCG 67132 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||||||| ||| || |||| Sbjct 67133 GCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTG 67192 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || || | ||| | || ||||| |||||||| Sbjct 67193 ACATTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTC 67252 Query 127097 TTTAC 127101 || || Sbjct 67253 TTAAC 67257 >seq356 Length=94465 Score = 118 bits (130), Expect = 1e-21 Identities = 316/480 (66%), Gaps = 15/480 (3%) Strand=Plus/Minus Query 47084 AAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTT 47143 |||||||||||||||| || | || | |||| || |||| | ||||| || | Sbjct 85182 AAAGGCCGAGTGGGCCCTGCGCTGGATCAACGACGAGGACTCCACTTTTGCCGAGCGCCT 85123 Query 47144 GATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTA 47203 | | || || || ||| |||||| |||||||||| ||| || || | || || | Sbjct 85122 GGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTG 85063 Query 47204 CATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGA 47263 | || | || | |||||||| ||||| || ||||||||| ||| |||| Sbjct 85062 GCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGA 85003 Query 47264 CGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAAC-ACTAGAGTCGATCAAAAGT 47322 ||| || ||||||||| ||||||| || | || || | || |||| | Sbjct 85002 CGAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTTCAGCCACC--------TCAAGAAG 84951 Query 47323 TGGACGTGCCCAC----CGT-CAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGA 47377 || || ||| ||| | ||| ||| ||||||| | ||| |||||||| || Sbjct 84950 CGGCCGCACCCCGATGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGC 84892 Query 47378 GTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAA 47437 || | |||| ||||| ||| || || | || |||||||| | ||||| | Sbjct 84891 TTTCCTGACCGATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGACTTATGAGCCA 84832 Query 47438 GTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCA 47497 |||||||||||||||||| ||||| ||||| || || | | ||| ||| | Sbjct 84831 GTACATCGAATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGTGAAGCACTACAA 84772 Query 47498 CACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACttttt 47557 | || ||||| ||||| || ||| | ||||| ||||| | |||||||| ||||| || Sbjct 84771 CGCCACAAATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 84712 >seq445 Length=91251 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || |||||||| || ||||| ||| | ||| || || || ||||| || || Sbjct 7680 GTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCG 7621 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | || || || || || || |||||||||||||| ||| || |||| Sbjct 7620 GCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTG 7561 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | |||||| | ||| || |||| ||| | || ||||| || || || Sbjct 7560 ACGTTG-TCAATGGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGGGT 7502 Query 127096 TTTTACAAAAATCTGCATG 127114 || || || ||||||||| Sbjct 7501 CTTGACGAAGATCTGCATG 7483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475495022665280