Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq866 104 2e-17 seq611 84.2 2e-11 >seq866 Length=73677 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || |||||||| || || |||||| | ||| ||| ||||| || Sbjct 71683 TGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGC 71624 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | ||||||||||| |||||||| |||||||| || || || || || || Sbjct 71623 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTC 71564 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | ||||||||| || || || ||||| || | || |||||||| Sbjct 71563 GTCTTGA-CGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTCTTGCCGGT 71505 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || ||||| Sbjct 71504 GAGGGTCTTGACGAAGATCTGCAT 71481 >seq611 Length=85925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | ||| || |||||||| ||||| ||||| || || |||||| Sbjct 39044 TGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGAATT 38985 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || |||| || || | || |||||||||||| || ||||| || | || || || Sbjct 38984 TTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCC 38925 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || ||||| Sbjct 38924 GTCAGGGTCTTGACGAAGATCTGCAT 38899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997708161120