Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq130 170 2e-37 seq356 116 5e-21 >seq130 Length=41321 Score = 170 bits (188), Expect = 2e-37 Identities = 497/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Minus Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 37634 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 37575 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || | ||| ||||| || | ||||||||| || ||||| ||| || |||||| Sbjct 37574 TTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGGTTGGCAGCGTCCTTG 37515 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || |||||||| |||| || ||||| || | ||| | | | Sbjct 37514 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACGGCGTACCAAAGCTTT 37455 Query 116619 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | || || |||| || || ||||| ||||||||| |||||| ||| Sbjct 37454 TGAGCCTTG-ACGGTTCGGCGA--GCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 37398 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || || || || || | || | ||| || || || | || || | || ||| Sbjct 37397 TCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGAC 37338 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 |||| || | || || ||||||||||| | ||| |||||||| || || ||||| Sbjct 37337 CATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAG 37278 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || || || || | || || | || || || | | || | || || | | Sbjct 37277 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 37218 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCA 116910 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 37217 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 37161 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||||| || || | || || ||| || ||||||||||| || | |||||| | | Sbjct 37160 CCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 37101 Query 116971 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || || || ||| | | | | | || |||||||| | Sbjct 37100 GAGACACCGTTAGTTCCGGCAATGTATGAGCC--GGTACCACGGATGCAGTGGATGTTGA 37043 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 || || || || ||| ||| ||| ||||| | ||||| || ||||||| | Sbjct 37042 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGC 36983 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 ||||||||||||| |||| | | || |||||||| |||||||| || | |||| Sbjct 36982 CATCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTG 36923 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||||||||||||||||| || | || ||| |||| Sbjct 36922 TACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 36886 >seq356 Length=94465 Score = 116 bits (128), Expect = 5e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 84978 AGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 85037 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 85038 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGAT 85097 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||||| || || || |||| || ||||||||||| Sbjct 85098 GCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAA 85136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499745887520