Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq130 181 2e-40 >seq130 Length=41321 Score = 181 bits (200), Expect = 2e-40 Identities = 337/490 (69%), Gaps = 10/490 (2%) Strand=Plus/Minus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 |||||||||||| |||||||| | ||||| | | ||| || ||||| | || ||||| Sbjct 38565 CACCGTGAACTGGATGGCGTTGGCAGCAGGTCGGGTTCGGAGGTAGTATGTTCCCGTCTT 38506 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 | ||||||| ||| ||||| | ||||||| | || | || | | |||| | Sbjct 38505 CAATCCCTTCTTCCAGCCGTAGAAGTGCATGCTCGTAAGCTGGCCAAAGCTGGGTGCTTG 38446 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 | ||| ||||||||| || |||| |||| ||||| || || || |||||||| | Sbjct 38445 GAGGTGGATGTTCAGACTTTGAGATTGGCAGATG-AAGGCACCTCGGTCGGCGGCCATGT 38387 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAG 204083 ||| ||| ||||||||| ||||||||||| |||||| ||| | || || | | | Sbjct 38386 CGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGCCTTGATGCGGTCGG 38327 Query 204084 GCACATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | | | || ||||| || |||||||||| || ||| || | | || || || Sbjct 38326 GAA----TGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCGGTTCTTCATC 38271 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | ||| ||||| || | || ||||| |||| ||| ||||||| || || Sbjct 38270 TGCTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAGCCAAGGGTTGACGACTTGG 38211 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| ||||| | ||||||| | |||||| | ||| | || || || |||| Sbjct 38210 AACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAGGCTCAAAGCACTCG 38151 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| ||||| ||||||| || || |||||||| || || || || |||||||| Sbjct 38150 TTGAAGCCGAGAATCTGACTTGTCGAAGCGGTGGGCATAGGGGCGAGCAGGAGGGAGTTT 38091 Query 204320 CGCACACCGT 204329 || | ||||| Sbjct 38090 CGGAGACCGT 38081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795145538864320