Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq866 161 2e-34 seq611 138 3e-27 seq279 136 9e-27 seq445 116 9e-21 >seq866 Length=73677 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || ||||||||||||| |||||| |||| | ||| | || || Sbjct 66830 AGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCC 66889 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || |||||||||||||| || || || ||| Sbjct 66890 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 66949 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||||| || || || |||| |||||| ||| Sbjct 66950 TGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGATGACTCAACTTCCAGCGTGATTGTC 67009 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| || Sbjct 67010 TTGCCGGTGAGGGTCTTGACAAAAATCTG 67038 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || ||||||||||| | ||||||||| | || || | || || Sbjct 66146 AGGACCAAGTGCAGTGTGGACTCCTTTTGAATGTTGTAGTCCGACAGGGTGCGGCCGTCC 66205 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | ||||| ||||||||| ||| || || ||| Sbjct 66206 TCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 66265 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| ||| || |||| |||||||| || || || || | ||||| ||| Sbjct 66266 TGAATCTTTGTCTTGACATTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATGGTC 66325 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| ||||| Sbjct 66326 TTGCCGGTGAGGGTCTTGACAAAGATTTG 66354 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| ||||||||||| | |||||| || | | || | || || Sbjct 71464 AGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGGCCGTCC 71405 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||||||||||||||| || |||||| ||| || || ||| Sbjct 71404 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGTTGATCCGGAGGAATGCCCTCCTTGTCC 71345 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| |||||||| || ||| || || | ||||| ||| Sbjct 71344 TGAATCTTCGTCTTGACATTGTCGATGGTGTCTGATGATTCCACCTCAAGAGTGATGGTC 71285 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 71284 TTGCCAGTGAGCGTCTTGACGAAGATCTG 71256 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| |||||||| |||| |||||| || | | || | ||||| Sbjct 66374 AGGACCAAGTGCAGAGTTGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 66433 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| |||||||||||||||||||| ||||||||| || || || ||| Sbjct 66434 TCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCC 66493 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||||||| || ||| || || | ||||| ||| Sbjct 66494 TGGATCTTGGTCTTTACGTTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTC 66553 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 66554 TTGCCAGTGAGGGTCTTGACGAAGATCTG 66582 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||||| |||| ||||||||| | ||| || | || || Sbjct 67058 AGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCCGACAATGTTCGGCCGTCC 67117 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||||||||||||||| |||||||||||||||||| || || || ||| Sbjct 67118 TCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 67177 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | |||||| | | || || || | ||||| ||| Sbjct 67178 TGGATCTTGGTCTTGACATTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTC 67237 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || ||||| || || Sbjct 67238 TTGCCAGTCAGAGTCTTAAC 67257 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | || |||||||| |||| |||||| || | | || | || || Sbjct 66602 AGGACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 66661 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||||||||||||||| |||||||||||||| || || || ||| Sbjct 66662 TCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 66721 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| |||| |||||||| || || || || | ||||| ||| Sbjct 66722 TGAATCTTGGTCTTTACGTTGTCGATGGTGTCTGATGACTCCACCTCGAGTGTGATTGTC 66781 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 66782 TTGCCGGTGAGGGTCTTGACGAAGATCTG 66810 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| ||||||||||| | |||||| || | | || | ||||| Sbjct 71692 AGGACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGAAAGGGTGCGGCCATCC 71633 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| |||||| ||||||||||| | || || ||||||||| ||| || || ||| Sbjct 71632 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 71573 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | || ||| || || | ||||| ||| Sbjct 71572 TGGATCTTCGTCTTGACGTTATCAATGGTGTCGGATGATTCCACCTCGAGTGTGATAGTC 71513 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 71512 TTGCCGGTGAGGGTCTTGACGAAGATCTG 71484 Score = 109 bits (120), Expect = 1e-18 Identities = 144/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| ||||| ||||||||||| | ||||||||| | | || | || || Sbjct 71236 AGGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 71177 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||||||||| ||||| |||||||| ||| || || || Sbjct 71176 TCAAGCTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTATCT 71117 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | ||||| ||| Sbjct 71116 TGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 71057 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || || ||||| || || Sbjct 71056 TTGCCAGTCAGAGTCTTGAC 71037 Score = 84.2 bits (92), Expect = 5e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 ||||||||||||||||||||| | || || || | || ||| | || |||||| ||||| Sbjct 67143 CTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAG 67084 Query 200995 AAAGAGTCTACTCTTCACCTTGTT 201018 || ||||| || |||||||||||| Sbjct 67083 AAGGAGTCCACACTTCACCTTGTT 67060 >seq611 Length=85925 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| | | ||| | || || Sbjct 39110 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 39051 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||| |||||||| ||| ||||| ||| Sbjct 39050 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 38991 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||| |||| |||| || ||| | | || || || | ||||| ||| Sbjct 38990 TGAATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 38931 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || || || || || || || Sbjct 38930 TTACCCGTCAGGGTCTTGACGAAGATCTG 38902 >seq279 Length=20706 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||||||| |||||||| |||| ||||||||| | | ||| | || || Sbjct 11539 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCC 11598 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||||||||| |||||||| || ||||| ||| Sbjct 11599 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCC 11658 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| |||| |||| || ||| | | || || || | ||||||||| Sbjct 11659 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 11718 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || || ||||| || || || Sbjct 11719 TTGCCGGTGAGGGTCTTGAC 11738 >seq445 Length=91251 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||| || ||||||| ||||||||| | | || | || ||| Sbjct 7695 AGGACGAGGTGGAGGGTCGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCT 7636 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||||||||| || ||||| || || || || || Sbjct 7635 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCT 7576 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | ||||| || | ||||| ||| Sbjct 7575 TGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAGGACTCTACCTCGAGGGTGATGGTC 7516 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 7515 TTGCCTGTGAGGGTCTTGACGAAGATCTG 7487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178906918005124