Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq356 197 1e-45 seq445 141 9e-29 seq866 127 2e-24 seq279 123 2e-23 seq611 116 4e-21 >seq356 Length=94465 Score = 197 bits (218), Expect = 1e-45 Identities = 411/598 (69%), Gaps = 17/598 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaa-TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGG 132685 |||| || || || || || || | || || ||| | ||| || || ||||| || | Sbjct 84707 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 84766 Query 132686 CTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 | |||||||||||| | | |||| || | || ||||| | ||| || || || | Sbjct 84767 TGGCGTTGTAGTGCTTCACGTTCCCGA---GGGCTACCAGCAGTCGGTCAGCGACAAATT 84823 Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTC 132800 ||||||| || ||| || || | | | || | || | | || || | | || || Sbjct 84824 CGATGTACTGGCTCATAAGTCGTGCGTTCATG-CCGATCA-ATGAACAGGGAAGAGCATC 84881 Query 132801 GGTGAG-AAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 ||| || ||||| | |||| |||| ||| | |||| | ||| | |||| | | Sbjct 84882 GGTCAGGAAAGCCT-GCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGG 84940 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | |||||| | | | || |||| | |||||||||||||||| |||| |||| Sbjct 84941 GGTGCGGCCGCTTCTTGAGGTGGCTGAAGAGCAAGCAAGCAAAGTCGGTGTGCAGACCCT 85000 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | | ||||| |||||| ||| || | ||||||||||| || || || |||| Sbjct 85001 CGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGA 85060 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||||||| ||| || ||||||| |||||| ||||| || || || | Sbjct 85061 GCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAAGGCAA 85120 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 ||||||||||| | || |||| || | | | |||||||||||| ||||| ||||||| Sbjct 85121 CCAGGCGCTCGGCAAAAGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCCACTCGGCCT 85180 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT-TCCGAG 133158 ||| |||||| || || || || ||||||| || | | | | | || | || | Sbjct 85181 TTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAG--GTACTCGCGCTGTGCGGG 85238 Query 133159 GAA-CGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215 | || | ||| |||||||||||| || || | || ||||| | ||||||| || Sbjct 85239 GTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTCCCTG 85296 Score = 183 bits (202), Expect = 3e-41 Identities = 178/226 (79%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCT 133276 |||||| |||||||| ||||| || ||||| | |||| || ||| |||| ||| |||| Sbjct 85375 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCT-GAGCTGAACCGCT 85433 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 |||| || || |||||||||||||| || ||||| || || || || ||||| ||| Sbjct 85434 CGACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCAAAGAATGCGAGGACGTGGCTGA 85493 Query 133337 TGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||| || ||||||||||||||||| | ||||||||| || |||||||||| |||| Sbjct 85494 TGAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAGAGGT 85553 Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||||| | ||||| ||||| ||||| || || |||||||| Sbjct 85554 CGATCTCCTCGGCAGTCCAGAACGATGCCTCTGCCTTCTTGTACAT 85599 >seq445 Length=91251 Score = 141 bits (156), Expect = 9e-29 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| || ||| || || Sbjct 7484 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 7543 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| || ||| | |||| Sbjct 7544 GACACCATTGACAACG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACC 7601 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 7602 AACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACA 7661 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||| |||| || || | || || ||| | | ||||| Sbjct 7662 ACATCCAAAAAGAATCGACCCTCCACCTCGTCCTCCGTCTCCGTGGCGG 7710 >seq866 Length=73677 Score = 127 bits (140), Expect = 2e-24 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 66357 ATGCAAATCTTTGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAGTCATCA 66298 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| ||| || | ||||| ||||| ||||| | |||| Sbjct 66297 GACACCATCGACAATG--TCAAGACAAAGATTCAGGACAAGGAGGGCATTCCTCCGGACC 66240 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | ||| ||||| ||| |||| |||| |||||||| ||||||| Sbjct 66239 AACAGCGATTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTGTCGGACTACA 66180 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||| |||||||| | || ||||| ||||| || ||| | | || |||| Sbjct 66179 ACATTCAAAAGGAGTCCACACTGCACTTGGTCCTCCGTCTCCGCGGTGGCC 66129 Score = 125 bits (138), Expect = 7e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 66585 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACACTCGAAGTTGAATCATCA 66526 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||||| || |||| ||||| ||||| || || | ||||| Sbjct 66525 GACA-CGATCGACAACGTAAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCA 66467 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| ||||| ||| |||| || | |||||||| ||| ||||| Sbjct 66466 ACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 66407 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || ||||| ||||| || || Sbjct 66406 CATCCAGAAGGAGTCAACTCTGCACTTGGTCCTCCG 66371 Score = 123 bits (136), Expect = 2e-23 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| || ||| || | |||| | | Sbjct 71036 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 71095 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| || || ||||| |||||| | ||||||||||| ||| Sbjct 71096 CAATG--TCAAGACCAAGATCCAAGATAAGGAGGGCATTCCCCCGGACCAACAGCGCCTC 71153 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || |||| ||||||||| |||||||||||| |||||| Sbjct 71154 ATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTCTCCGACTACAACATTCAAAAG 71213 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || || || ||||| || || Sbjct 71214 GAGTCTACTCTTCACTTGGTCCTCCG 71239 Score = 116 bits (128), Expect = 4e-21 Identities = 158/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| |||| || ||| | | Sbjct 66813 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACACTCGAGGTGGAGTCATCA 66754 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| |||||| || || | ||||| ||||| || ||| | |||| Sbjct 66753 GACACCATCGACAACG--TAAAGACCAAGATTCAGGACAAGGAGGGTATCCCCCCGGACC 66696 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| || || || || || |||| |||||||| ||| |||| Sbjct 66695 AGCAGCGCCTCATCTTCGCCGGAAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACA 66636 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| | || |||| ||||| || || Sbjct 66635 ACATCCAGAAGGAGTCCACATTGCACTTGGTCCTCCG 66599 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| || ||||| | || || ||| | | Sbjct 67041 ATGCAGATTTTTGTCAAGACCCTCACCGGCAAGACAATCACGCTGGAAGTTGAGTCATCA 66982 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 66981 GACA-CGATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 66923 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || |||| ||||| || || ||||| Sbjct 66922 GCAGCGCCTTATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGCACTCTTTCTGATTACAA 66863 Query 38423 CATCCAAAAGGA 38434 |||||||||||| Sbjct 66862 CATCCAAAAGGA 66851 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| | || || ||| || |||||| | | | Sbjct 67258 CGTTAAGACTCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCCTCCGACACCATTGA 67199 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| ||||| ||||| || || | ||||| ||||| || Sbjct 67198 CAATG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTT 67141 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || |||| || || | |||||||||||||| ||| Sbjct 67140 ATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACATTGTCGGACTACAACATCCAGAAG 67081 Query 38433 GA 38434 || Sbjct 67080 GA 67079 >seq279 Length=20706 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || ||||| ||||| || |||||| |||| |||||| | ||||| | | | Sbjct 11739 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11680 Query 38315 AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | |||| || |||| ||||| || || || ||| | ||||||||||| |||| Sbjct 11679 CGC-CGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCA 11621 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| ||||| ||||| || |||| ||||| ||| ||||||||||||||| |||| Sbjct 11620 TCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGG 11561 Query 38434 AAGCGACGCTGCATTTGGTGCTGCG 38458 | | || || || ||||| || || Sbjct 11560 AGTCCACTCTCCACTTGGTCCTCCG 11536 >seq611 Length=85925 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || |||||| |||| || ||| | || Sbjct 38899 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 38958 Query 38304 GACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | | |||| ||||| | ||||| || || |||||| | ||||| Sbjct 38959 GACTCCATCGACGC-CGTCAAGACCAAAATTCAGGACAAGGAAGGTATTCCCCCGGACCA 39017 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 39018 ACAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 39077 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || | ||||| || Sbjct 39078 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTTCG 39113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166722900480