Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq691 360 2e-94 seq22 114 2e-20 >seq691 Length=3285 Score = 360 bits (398), Expect = 2e-94 Identities = 996/1515 (66%), Gaps = 14/1515 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 |||||||| || ||||| | | ||||| || || ||||| || ||||| | || || Sbjct 232 TCAATGTCGTCCTTCGACAGCCGTCCCTTGTCGTTGGTAATGGTGATCTTCTGCGACTTG 291 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | || ||| ||| | || || || | ||| || || || |||||||| | Sbjct 292 CCGGTGGTCTTGTCTGCGGCGGAAACGTTGAGAATGGAGTTGGCGTCGACATCGAAGGTG 351 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||||| || ||| | ||||||| ||||| || | | || || | || Sbjct 352 ACCTCGATTTGGGGAACACCACGGGGTGCGGGGGGAATGCCGGAGAGCTCGAACTTGCCG 411 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATT-GT-CACCG 6848 || || |||| ||| | | | ||| ||||| || ||||| | || || ||||| Sbjct 412 AGCAAGTTGTTGTCCTTTGTCCGTGCACGCTCACCCTCGTAGACCTGGATCAGTACACCG 471 Query 6849 CAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTAT 6908 || || || || || |||||||| | ||||| | || | || || | Sbjct 472 --GGCTGGTTGTCGGCGTATGTGGAGAAGATCTCGGACTTCTTGGTGGGGACAGTGGTGT 529 Query 6909 TTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTG 6968 | | | || | || || | | ||| || ||| |||| || | || ||||| | Sbjct 530 TGCGCTTGATGAGGGGAGTGAAGACACCGCCAGCAGTCTCGATACCCATGGAGAGAGGAG 589 Query 6969 TCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGG 7028 || || | ||| | ||||||||| ||| ||||| | | ||||||| Sbjct 590 CGACATCGAGGAGGAGCAGGTCTTGGGTCTTCTCGGAGGTGTCACCGGAGAGAATGGCGG 649 Query 7029 CTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTT 7088 | ||||| | || ||||| ||||| ||||| |||||||| || | || || | || Sbjct 650 CCTGGACAGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTGGGCTCGC 709 Query 7089 TACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGA 7148 |||||| || | || | | | || | || || || || || ||||||| Sbjct 710 GACCGTTGAAGAAGTCGCGGAGGAGCTTCTGGACACGGGGAATACGCGTGGAACCACCGA 769 Query 7149 CCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGA 7208 | | ||||| || || || | || || ||||| ||||| || || || |||| Sbjct 770 CAAGGACGATCTCGTTGACGGAGGCCTTGTCTATCTTGGAGTCGCGGAGGACCTTCTCGA 829 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAA 7268 | || || || | ||| | ||| |||||| ||||| ||||| ||||| || | Sbjct 830 CGGGCTCGATGGTGTGGGAGAAGAGGTCACCACACAGCTCCTCGAAACGGGCACGAGTGA 889 Query 7269 TGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCG 7328 |||| || ||||| || | ||| || | | || || || || ||||| || || || | Sbjct 890 TGGAGGTGTAGAAGTCGATGCCCTCAAAGAGGGAGTCGATCTCGATGGTGGTCTGGGCGG 949 Query 7329 TCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCG 7388 ||||| | || |||||||| ||||| || || || | |||||||| |||||| | Sbjct 950 CGGAAGAGAGAGTGCGCTTTGCTCGCTCGGCGGCGGTACGGAGACGACGAACGGCACGGG 1009 Query 7389 GGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGA 7448 || || || ||||| | || || || ||||| | |||||| | || Sbjct 1010 CAGAGGAGGTGATGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACGAAGTGGGTTACGA 1069 Query 7449 GTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAA 7508 | | ||||| || || ||||||||||| || || || ||||| || ||||| || | Sbjct 1070 GACGGTTGTCGAAGTCCTCGCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACCTCGA 1129 Query 7509 AGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAA 7568 | || || | || ||| | | | ||| ||||| ||||| || || |||| ||| || | Sbjct 1130 ATATGCCCTCCTCGATGGTGAGGAGCGAGACATCGAACGTGCCTCCTCCCAAGTCGAAGA 1189 Query 7569 TGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCG 7628 |||| |||||| | ||| | || ||||| || |||||||| || || || || || | Sbjct 1190 TGAGAACGTTCTTCTCGCCCTCGCCCTTCTTGTCAAGACCGTAAGCAATGGCAGCGGCGG 1249 Query 7629 TTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 | || || || || || || | ||| ||| || || ||||| || | || || || || Sbjct 1250 TGGGCTCGTTGATGATTCGCATGAC-GTTGAGACCGGCAATGGTACCGGCGTCCTTGGTG 1308 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTC 7747 || |||||||| || ||||| |||||||| || || || ||||| |||||| |||| Sbjct 1309 GCCTGTCGTTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTCCTTGACGGAG 1368 Query 7748 TTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCT 7807 |||||| || | || || | || ||| ||| |||||||| | || | ||| Sbjct 1369 CCACCGAGGTAGGCCTCGGCAGTCTCGCGCATCTTGAGCAGAACCATGGCGGAGACCTCC 1428 Query 7808 TCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGC 7866 |||| | || ||| || || || || || | || || | || || ||||| | Sbjct 1429 TCAGGGGTGAA-TGTCTTGGTCTCGCCCTTGTACTCGACCTGGATTATTGGTTT---GGT 1484 Query 7867 AGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGA 7926 | | | ||| ||||| | | ||| | ||||| ||| || |||| ||| | Sbjct 1485 ACCTTGGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGACTGTACCTCGGAGTCAGC 1544 Query 7927 AAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGT 7986 ||||| | ||||| || ||||| || || || |||||||| | |||||||||||| || Sbjct 1545 GAACTTGCGGCCGATGAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGGT 1604 Query 7987 TTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGA 8046 |||||||| || ||||| ||||| || || || | | || || || |||||||| || Sbjct 1605 CTGGTTCTTGGCGGCGTCACCGATGAGGCGCTC-TGA--GTCGGTGAAGGCGACGTATGA 1661 Query 8047 TGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGAC 8106 ||||| || || || || |||||||| || || | || || ||||| |||||||| || Sbjct 1662 AGGGGTTGTGCGGTTACCCTGGTCGTTGGCGATGACCTCAACCCGGTCATTTTGCCATAC 1721 Query 8107 GCCGACGCACGAATA 8121 | | || || || || Sbjct 1722 GGCAACACAGGAGTA 1736 >seq22 Length=61949 Score = 114 bits (126), Expect = 2e-20 Identities = 279/414 (67%), Gaps = 18/414 (4%) Strand=Plus/Minus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 35145 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGGGAGTCG 35086 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | || || || || | | || | ||||||||||||||||| ||||| | Sbjct 35085 ACCTCGACAGTGGTCTGGGTGACACTG--GACAGTGTTCGCTTTGCGCGCTCGCACGCAG 35028 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTT---ACCGGAAATATCTTTCTTATGTTTACGTT 7421 || | |||||| | |||||| |||| |||| || || ||| | || || | Sbjct 35027 ACCGCAGACGACGGATGGCACGGGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCT 34971 Query 7422 TAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 ||||| | |||||| |||| | | | | | ||||| || |||||||| | || Sbjct 34970 CGAACTCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCGAGATG 34913 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| | || | ||| || ||||| | | || || Sbjct 34912 GGTGTCACCAGCGGTTGCCTTGACGGCGAAAACACCACCAGTGATGTTGAGAAGGGAGAC 34853 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTC 7597 ||| ||||| || || || ||||| |||||||| |||||| | ||| ||| || || Sbjct 34852 ATCGAACGTGCCTCCTCCGAGGTCGAAAATGAGAACGTTCTTCTCG--GTCGATGACTTG 34795 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||||| || || || || || || || || || || ||||| ||| Sbjct 34794 GAGTCGAGACCGTAAGCAATGGCGGCAGCGGTGGGCTCGTTGATGATACGGAGA 34741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635125083136480