Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq130 192 7e-44 seq356 118 1e-21 >seq130 Length=41321 Score = 192 bits (212), Expect = 7e-44 Identities = 476/716 (66%), Gaps = 15/716 (2%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||||||||| | || |||||||| Sbjct 36886 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCG 36945 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || || ||| ||||||| |||| |||||||| Sbjct 36946 TGCTTCCTGGTCACCATGAAGGACGACTCGATCGATGGCATCTACGACACTCTCAAGACC 37005 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 37006 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 37065 Query 111885 AACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||| || || || || || ||| || | ||||| | || ||||||| Sbjct 37066 ACC--GGCTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 37123 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 |||| || ||| ||| || ||||| || |||| | ||| ||||| || || Sbjct 37124 GCGTCTTCAACAACACCGCCCGCTACGTCGACCAGGGTGGCAACAAGCGTC-CA--GGTG 37180 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 37181 CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGA 37240 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| || | Sbjct 37241 AGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTG 37300 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | ||||||||| |||| || | | || | ||||| || | || || | | || Sbjct 37301 ACTTGTTCATGAAGCGAGTCGAACAAAACGGAGAATGGTCGCTGATGTGCCCCGCCGAGT 37360 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||||||||| | |||| | || || || || || || |||||| ||||||||| Sbjct 37361 GCCCCGGTCTCGCTGATGTCTACGGCGACGAATTCGAGGCTCTCTACGAGAAGTACGAGC 37420 Query 112237 AAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 || |||| || | || || || ||| | | ||| | || ||||| || Sbjct 37421 GTGAGGGTCGTGC-TCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAG 37479 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 | || || |||||||| | || | ||||||||||| ||||| |||| ||| Sbjct 37480 GCCCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCCAACCGCAAGTCG 37539 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | ||| |||||| | |||||||| || || || ||| |||| Sbjct 37540 AACCAAAAGAACCTCGGTACCATCAAGTGCTCCAACCTGTGCACGGAGATCATGGA 37595 >seq356 Length=94465 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 ||||| ||||| || | || ||||| || ||||| ||||||||||| || || ||| Sbjct 85136 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTC 85077 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 | | || | |||||||||||||| ||||||||||| |||||| ||||||||||||| Sbjct 85076 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 85017 Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || ||| || |||||||| || ||| || ||||| Sbjct 85016 CTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 84979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734857979840