Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20walkeri_20[genbank_20GCA_5F001645055.1_202016-05-16] 972 sequences; 24,344,748 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq130 181 1e-40 >seq130 Length=41321 Score = 181 bits (200), Expect = 1e-40 Identities = 562/864 (65%), Gaps = 17/864 (2%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| ||| || || |||| |||| Sbjct 37649 GGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATG 37590 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| |||||| | ||| ||| ||| | |||||| || ||||| ||| | Sbjct 37589 ATCTCCGTGCACAGGTTGGAGCACTTGATGGTACCGAGGTTCTTTTGGTTCGACTTGCGG 37530 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||| || ||||| || |||||| | ||| | ||||| |||||||| | || ||||| | Sbjct 37529 TTGGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGGGCCTCGAGAACG 37470 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 || | ||| | | || ||| ||| | ||| |||| || ||||||||| Sbjct 37469 GCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTC 37410 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||| | |||| ||||| | ||||| ||||||| ||||| || | |||| Sbjct 37409 TCGTAGAGAGCCTCGAATTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGG 37350 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || | || ||||| | ||| | || || | ||||||||||| |||||| ||||| Sbjct 37349 CACATCAGCGACCATTCTCCGTTTTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 37290 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | || |||| || |||||| || |||| || | || ||||| | || || Sbjct 37289 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 37230 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG- 110759 | || || | || || |||||||| || || | |||| |||| || || ||| Sbjct 37229 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 37170 Query 110760 --ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATA 110817 || |||||| || ||||| || ||| |||||||| | |||||||| | Sbjct 37169 TTGTTGCCACCCTGGTCGACGTAGCGGGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 37110 Query 110818 ATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGG 110877 || || | || ||| || || || ||| || | |||| ||| |||| Sbjct 37109 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGG 37050 Query 110878 ATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTACC 110936 || | | || || ||||| ||| ||| || || || || ||| |||| || | Sbjct 37049 ATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT-TGAGAGTGTC 36991 Query 110937 ATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGG 110996 || || ||||| ||||| || |||| ||| | || ||||| || ||||| ||||| Sbjct 36990 GTAGATGCCATCGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGG 36931 Query 110997 ACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGACA 111055 || || || || |||||||| || || | ||||| |||| || | | |||| Sbjct 36930 GTTGGGTGTACCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACA 36872 Query 111056 TCTTGTTGTATGTGTCGAGTGC-----GGAGGGTACATCTTTACCGTGAATACCAATGGC 111110 | |||||| ||||||| || || || || | ||||| || || | || Sbjct 36871 TGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAAC-----TCCCGTGGATGCCGACAGC 36817 Query 111111 AACTCGCATGAACATATATTGAGG 111134 ||||||||||| ||| | ||| || Sbjct 36816 AACTCGCATGAGCATGTGTTGGGG 36793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968843941600